RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 RAB11FIP4Q86YS3 637 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 SPARTQ8N0X7 666 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 ADAMTS18Q8TE60 1221 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 TMEM171Q8WVE6 324 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 RAPGEF4Q8WZA2 1011 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 LRGUKQ96M69 825 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 NT5C1BQ96P26 610 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 ACO2Q99798 780 aaKnown RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 C17orf80Q9BSJ5 609 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 ZMAT3Q9HA38 289 aaKnown RBP5.81□□□□□ -1.48
CD46-213ENST00000471987 KLHL13Q9P2N7 655 aa5.81□□□□□ -1.48
CD46-213ENST00000471987 TCRBV5S1A1TA0A578 114 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 ANKRD62A6NC57 917 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 BTBD19C9JJ37 291 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 E5RJQ4 531 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 MARCH6O60337 910 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 FGAP02671 866 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 KITP10721 976 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 IL1R2P27930 398 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 NR4A2P43354 598 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 CCNIQ14094 377 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 ANO6Q4KMQ2 910 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 C4orf46Q504U0 113 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 B3GNT9Q6UX72 402 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 BCDIN3DQ7Z5W3 292 aaKnown RBP5.8□□□□□ -1.48
CD46-213ENST00000471987 KRT73Q86Y46 540 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 PPP1R35Q8TAP8 253 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 PIGOQ8TEQ8 1089 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 TAAR9Q96RI9 348 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 MMS19Q96T76 1030 aa5.8□□□□□ -1.48
CD46-213ENST00000471987 GBA2Q9HCG7 927 aaPredicted RBP5.8□□□□□ -1.48
CD46-213ENST00000471987 SCAF8Q9UPN6 1271 aaKnown RBP5.8□□□□□ -1.48
CD46-213ENST00000471987 hCG_2014768A0A024R1R8 64 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 TMEM232C9JQI7 657 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 AKAP10O43572 662 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 GCATO75600 419 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 PHKG2P15735 406 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 ATP5F1P24539 256 aaPredicted RBP5.79□□□□□ -1.48
CD46-213ENST00000471987 PRKAR1BP31321 381 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 GKP32189 559 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 AGFG1P52594 562 aaKnown RBP5.79□□□□□ -1.48
CD46-213ENST00000471987 BCAT1P54687 386 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 ZNF268Q14587 947 aaPredicted RBP5.79□□□□□ -1.48
CD46-213ENST00000471987 RABEP1Q15276 862 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 ZNF518BQ9C0D4 1074 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 SMURF2Q9HAU4 748 aa5.79□□□□□ -1.48
CD46-213ENST00000471987 M0R3H8 397 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 CES2O00748 559 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 DSCR3O14972 297 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 PMPCBO75439 489 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 PDGFRBP09619 1106 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 EN2P19622 333 aaPredicted RBP5.78□□□□□ -1.48
CD46-213ENST00000471987 RAB27AP51159 221 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 PTCHD3Q3KNS1 767 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 Q4G0T1 1027 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 TMEM63BQ5T3F8 832 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 DENND2CQ68D51 928 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 AWAT2Q6E213 333 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 TPH2Q8IWU9 490 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 NANOGP1Q8N7R0 232 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 CCDC17Q96LX7 622 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 RTFDC1Q9BY42 306 aaPredicted RBP5.78□□□□□ -1.48
CD46-213ENST00000471987 A1CFQ9NQ94 594 aaKnown RBP5.78□□□□□ -1.48
CD46-213ENST00000471987 XPNPEP3Q9NQH7 507 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 TRNAU1APQ9NX07 287 aaKnown RBP5.78□□□□□ -1.48
CD46-213ENST00000471987 ASIC5Q9NY37 505 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
CD46-213ENST00000471987 DRG1Q9Y295 367 aaKnown RBP5.78□□□□□ -1.48
CD46-213ENST00000471987 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 FCHO1O14526 889 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 RFPL1O75677 317 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 FGBP02675 491 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 A1BGP04217 495 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 EPHA3P29320 983 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 SLC7A1P30825 629 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 PSG6Q00889 435 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 INSCQ1MX18 579 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 MEX3CQ5U5Q3 659 aaKnown RBP5.77□□□□□ -1.49
CD46-213ENST00000471987 DCAF12L1Q5VU92 463 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 PTCHD4Q6ZW05 846 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 EPM2AIP1Q7L775 607 aaPredicted RBP5.77□□□□□ -1.49
CD46-213ENST00000471987 TECPR1Q7Z6L1 1165 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 MRPL10Q7Z7H8 261 aaKnown RBP5.77□□□□□ -1.49
CD46-213ENST00000471987 ZBTB34Q8NCN2 500 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 IL31RAQ8NI17 732 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 SUCLG2Q96I99 432 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 ZC3H10Q96K80 434 aaKnown RBP5.77□□□□□ -1.49
CD46-213ENST00000471987 PPP1R9BQ96SB3 815 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 EFHD1Q9BUP0 239 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 CDH19Q9H159 772 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 DDX56Q9NY93 547 aaKnown RBP5.77□□□□□ -1.49
CD46-213ENST00000471987 CDY1Q9Y6F8 540 aa5.77□□□□□ -1.49
CD46-213ENST00000471987 SOCS2O14508 198 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 TUSC2O75896 110 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 MT-CO3P00414 261 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 MTHFSP49914 203 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 POLGP54098 1239 aaPredicted RBP5.76□□□□□ -1.49
CD46-213ENST00000471987 NPNTQ6UXI9 565 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 MAEAQ7L5Y9 396 aa5.76□□□□□ -1.49
CD46-213ENST00000471987 DNAJB14Q8TBM8 379 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms