RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 ANGPT1Q15389 498 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 TRIM68Q6AZZ1 485 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 CRYBG2Q8N1P7 616 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 SLC35C1Q96A29 364 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 CEP295NLQ96MC4 621 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 IRF2BPLQ9H1B7 796 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 CLSTN2Q9H4D0 955 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 CISHQ9NSE2 258 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 SMPD4Q9NXE4 827 aa15.69■□□□□ 0.1
SSR4-208ENST00000471880 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
SSR4-208ENST00000471880 RIF1Q5UIP0 2472 aaKnown RBP15.68■□□□□ 0.1
SSR4-208ENST00000471880 GOLGA6L22H0YM25 854 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 CILPO75339 1184 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 CCDC192P0DO97 292 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
SSR4-208ENST00000471880 GLULP15104 373 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
SSR4-208ENST00000471880 IFNAR2P48551 515 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 YWHAEP62258 255 aaKnown RBP15.68■□□□□ 0.1
SSR4-208ENST00000471880 INCA1Q0VD86 236 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 MTF1Q14872 753 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 PAQR9Q6ZVX9 377 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 PDZD8Q8NEN9 1154 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 SCAMP5Q8TAC9 235 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 SH3RF2Q8TEC5 729 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 NELL2Q99435 816 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 SMOQ99835 787 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 TTLL2Q9BWV7 592 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 EBF3Q9H4W6 596 aa15.68■□□□□ 0.1
SSR4-208ENST00000471880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.68■□□□□ 0.1
SSR4-208ENST00000471880 ZFHX2Q9C0A1 2572 aaPredicted RBP15.67■□□□□ 0.1
SSR4-208ENST00000471880 SCAMP3O14828 347 aaKnown RBP15.67■□□□□ 0.1
SSR4-208ENST00000471880 BEST1O76090 585 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 GNA14O95837 355 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 CD19P15391 556 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 PPP3CCP48454 512 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 CUL2Q13617 745 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 ITPRIPL2Q3MIP1 535 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 PPM1KQ8N3J5 372 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 TTC39CQ8N584 583 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 TMEM176AQ96HP8 235 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 NT5C1BQ96P26 610 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
SSR4-208ENST00000471880 C8orf33Q9H7E9 229 aaPredicted RBP15.67■□□□□ 0.1
SSR4-208ENST00000471880 TRPV5Q9NQA5 729 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 DUS2Q9NX74 493 aaKnown RBP15.67■□□□□ 0.1
SSR4-208ENST00000471880 GMIPQ9P107 970 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 DLGAP2Q9P1A6 1054 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 WNT6Q9Y6F9 365 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 FAM186AA6NE01 2351 aa15.67■□□□□ 0.1
SSR4-208ENST00000471880 MYOFQ9NZM1 2061 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 ZNF840PA6NDX5 716 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 SOBPA7XYQ1 873 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 SPECC1L-ADORA2AF8WAN1 911 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 LAMTOR5O43504 91 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 AFPP02771 609 aaKnown RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 ARSAP15289 507 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 ACO1P21399 889 aaKnown RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 WEE1P30291 646 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 RUNX3Q13761 415 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 PON2Q15165 354 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 PPP1R26Q5T8A7 1209 aaPredicted RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 ALYREFQ86V81 257 aaKnown RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 IPO9Q96P70 1041 aaKnown RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 HNRNPABQ99729 332 aaKnown RBP15.66■□□□□ 0.1
SSR4-208ENST00000471880 LMAN1LQ9HAT1 526 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 RWDD2AQ9UIY3 292 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 CPQQ9Y646 472 aa15.66■□□□□ 0.1
SSR4-208ENST00000471880 MYO16Q9Y6X6 1858 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 ARNTLO00327 626 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 IRF1P10914 325 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 TBXAS1P24557 533 aaPredicted RBP15.65■□□□□ 0.1
SSR4-208ENST00000471880 CTHP32929 405 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 MTIF2P46199 727 aaKnown RBP15.65■□□□□ 0.1
SSR4-208ENST00000471880 SLC8A3P57103 927 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 KCNH2Q12809 1159 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 ZNF268Q14587 947 aaPredicted RBP15.65■□□□□ 0.1
SSR4-208ENST00000471880 PDGFRLQ15198 375 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 CLEC20AQ6ZU45 233 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 RALGPS2Q86X27 583 aaPredicted RBP15.65■□□□□ 0.1
SSR4-208ENST00000471880 C1orf210Q8IVY1 113 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 CPA6Q8N4T0 437 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 MLKLQ8NB16 471 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 SLC4A11Q8NBS3 891 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 ZMIZ2Q8NF64 920 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 RIN3Q8TB24 985 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 CNOT6LQ96LI5 555 aaKnown RBP15.65■□□□□ 0.1
SSR4-208ENST00000471880 OSBPL6Q9BZF3 934 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 FBXO44Q9H4M3 255 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 LMBRD1Q9NUN5 540 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 GCNT4Q9P109 453 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 DACH1Q9UI36 760 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 COQ4Q9Y3A0 265 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 PCDHB4Q9Y5E5 795 aa15.65■□□□□ 0.1
SSR4-208ENST00000471880 LEFTY2O00292 366 aa15.64■□□□□ 0.09
SSR4-208ENST00000471880 PES1O00541 588 aaKnown RBP15.64■□□□□ 0.09
SSR4-208ENST00000471880 RAD23BP54727 409 aa15.64■□□□□ 0.09
SSR4-208ENST00000471880 USP4Q13107 963 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms