RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 EIF2AK1Q9BQI3 630 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 LINC00597Q9H2U6 94 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 PDZD7Q9H5P4 517 aa6.35□□□□□ -1.39
VARS-222ENST00000470953 BCCIPQ9P287 314 aaKnown RBP eCLIP6.35□□□□□ -1.39
VARS-222ENST00000470953 ZFC3H1O60293 1989 aaKnown RBP6.35□□□□□ -1.39
VARS-222ENST00000470953 A0A087X0B3 334 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 IGHV1OR15-9A0A0B4J2B8 117 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 TCRBV21S2A2A0A5A6 115 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 ARHGEF35A5YM69 484 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 H7C4K7 107 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 PODXLO00592 558 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 SYN3O14994 580 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 EFSO43281 561 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 RFPL3O75679 317 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 ALDH1A2O94788 518 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 MPOP05164 745 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 SFTPCP11686 197 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 GLDCP23378 1020 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 TIE1P35590 1138 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 CCT6AP40227 531 aaKnown RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 EPHB3P54753 998 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 AMPD2Q01433 879 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 ZRSR1Q15695 479 aaKnown RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 ARHGAP15Q53QZ3 475 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 PPP1R26Q5T8A7 1209 aaPredicted RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 TXNDC8Q6A555 127 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 HSCBQ8IWL3 235 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 C4orf19Q8IY42 314 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 MAB21L3Q8N8X9 362 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 TTC16Q8NEE8 873 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 CDK5RAP3Q96JB5 506 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 VCPIP1Q96JH7 1222 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 ZMAT2Q96NC0 199 aaKnown RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 ACAP3Q96P50 834 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 KDM4CQ9H3R0 1056 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 RGL1Q9NZL6 768 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 FTSJ1Q9UET6 329 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 PCDHB1Q9Y5F3 818 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 PCDHGA1Q9Y5H4 931 aa6.34□□□□□ -1.39
VARS-222ENST00000470953 TIMM13Q9Y5L4 95 aaPredicted RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 ZNF638Q14966 1978 aaKnown RBP6.34□□□□□ -1.39
VARS-222ENST00000470953 STAB1Q9NY15 2570 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 UBE4BO95155 1302 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 TMEM131Q92545 1883 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SMIM28A0A1B0GU29 152 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 LRRIQ4A6NIV6 560 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MTSS1O43312 755 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 DGAT1O75907 488 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 GABRG2P18507 467 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 ATF6P18850 670 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 PDCP20941 246 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 ARL2P36404 184 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 GRK6P43250 576 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 KIR2DL1P43626 348 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 ALDH1A3P47895 512 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SLC6A11P48066 632 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 CD97P48960 835 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 POU5F1BQ06416 359 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MXD4Q14582 209 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 ZSCAN23Q3MJ62 389 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 RILPL1Q5EBL4 403 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 KRT79Q5XKE5 535 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 CENPPQ6IPU0 288 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MAEAQ7L5Y9 396 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 ZBTB8OSQ8IWT0 167 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 CPA6Q8N4T0 437 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 ZCCHC9Q8N567 271 aaKnown RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 STKLD1Q8NE28 680 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MCPH1Q8NEM0 835 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 DDX12PQ92771 950 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 C18orf25Q96B23 403 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 ZNF419Q96HQ0 510 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 SUSD3Q96L08 255 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SLC22A12Q96S37 553 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 POLR3FQ9H1D9 316 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 TMEM60Q9H2L4 133 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 FAM124BQ9H5Z6 455 aaPredicted RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 TUFT1Q9NNX1 390 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 ANKEF1Q9NU02 776 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 TDP1Q9NUW8 608 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 DUS2Q9NX74 493 aaKnown RBP6.33□□□□□ -1.4
VARS-222ENST00000470953 DONSONQ9NYP3 566 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 CALCOCO1Q9P1Z2 691 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SUSD2Q9UGT4 822 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MAFFQ9ULX9 164 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 SLCO1B1Q9Y6L6 691 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 MYOFQ9NZM1 2061 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 DENND4CQ5VZ89 1909 aa6.33□□□□□ -1.4
VARS-222ENST00000470953 A0A087WWV3 80 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 MTMR11A4FU01 709 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 LAD1O00515 517 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 WNT7AO00755 349 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 KCNK3O14649 394 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 ENC1O14682 589 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 CD2BP2O95400 341 aaKnown RBP6.32□□□□□ -1.4
VARS-222ENST00000470953 DRD2P14416 443 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 GNSP15586 552 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 LIG1P18858 919 aa6.32□□□□□ -1.4
VARS-222ENST00000470953 AVPR1AP37288 418 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms