RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TJP2Q9UDY2 1190 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 CD207Q9UJ71 328 aa15.62■□□□□ 0.09
COL9A3-209ENST00000469852 MAGED2Q9UNF1 606 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-209ENST00000469852 AKR1B15C9JRZ8 316 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-209ENST00000469852 PIK3R2O00459 728 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 XYLBO75191 536 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 SETSIPP0DME0 302 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 HNRNPH3P31942 346 aaKnown RBP15.61■□□□□ 0.09
COL9A3-209ENST00000469852 PLA2G4AP47712 749 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 IFRD2Q12894 506 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-209ENST00000469852 MEA1Q16626 185 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 SLC5A9Q2M3M2 681 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 RAB41Q5JT25 222 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 DENND5BQ6ZUT9 1274 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 DRC7Q8IY82 874 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 ADAMTS19Q8TE59 1207 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 SYN2Q92777 582 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-209ENST00000469852 TCEAL4Q96EI5 215 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 ZNF512Q96ME7 567 aaPredicted RBP15.61■□□□□ 0.09
COL9A3-209ENST00000469852 IL21Q9HBE4 155 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 ARHGAP20Q9P2F6 1191 aa15.61■□□□□ 0.09
COL9A3-209ENST00000469852 DENND4CQ5VZ89 1909 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 TADA3O75528 432 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 RHOP08100 348 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 CSH1P0DML2 217 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 CSH2P0DML3 217 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 PGFP49763 221 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 MRE11P49959 708 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 NOMO3P69849 1222 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 KLHL30Q0D2K2 578 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 VEPH1Q14D04 833 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 POTEHQ6S545 545 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-209ENST00000469852 TMEM150AQ86TG1 271 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 ZNF677Q86XU0 584 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 NUP93Q8N1F7 819 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 OR8K1Q8NGG5 319 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 NDRG1Q92597 394 aaKnown RBP15.6■□□□□ 0.09
COL9A3-209ENST00000469852 CPXM1Q96SM3 734 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 TTLL2Q9BWV7 592 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 UBXN6Q9BZV1 441 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 NUCKS1Q9H1E3 243 aaKnown RBP15.6■□□□□ 0.09
COL9A3-209ENST00000469852 LHX5Q9H2C1 402 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 PIDD1Q9HB75 910 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 PNPLA8Q9NP80 782 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 IL37Q9NZH6 218 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 USP15Q9Y4E8 981 aaPredicted RBP15.6■□□□□ 0.09
COL9A3-209ENST00000469852 ASB3Q9Y575 518 aa15.6■□□□□ 0.09
COL9A3-209ENST00000469852 ANAPC1Q9H1A4 1944 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 DDX3XO00571 662 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 MBTPS2O43462 519 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 MOSPD3O75425 235 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CYP1A1P04798 512 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 SERPING1P05155 500 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 TPM1P09493 284 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 MYL4P12829 197 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 GJA1P17302 382 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 PTPN2P17706 415 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CDH5P33151 784 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 RPL34P49207 117 aaKnown RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 TKTL1P51854 596 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 KIF11P52732 1056 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 EPHA5P54756 1037 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 ITIH3Q06033 890 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 ADIGQ0VDE8 80 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 PDCLQ13371 301 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 PTPN20Q4JDL3 420 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 TDRD12Q587J7 1177 aaKnown RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 PRSS36Q5K4E3 855 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 NAA35Q5VZE5 725 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 GAREM2Q75VX8 874 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 ITIH5Q86UX2 942 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 DNAAF5Q86Y56 855 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CNGA4Q8IV77 575 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 ELMOD1Q8N336 334 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 ITFG1Q8TB96 612 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CLEC4CQ8WTT0 213 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CPA5Q8WXQ8 436 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 KCTD13Q8WZ19 329 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 SUSD6Q92537 303 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 TRMT2BQ96GJ1 504 aaKnown RBP15.59■□□□□ 0.09
COL9A3-209ENST00000469852 MYRFLQ96LU7 910 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 CHP1Q99653 195 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 SLC4A5Q9BY07 1137 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 PDCL3Q9H2J4 239 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 POMKQ9H5K3 350 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 TAS2R14Q9NYV8 317 aa15.59■□□□□ 0.09
COL9A3-209ENST00000469852 FAM92AA1XBS5 289 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 E5RJQ4 531 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 F11P03951 625 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 CCDC172P0C7W6 258 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 UNGP13051 313 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-209ENST00000469852 LCP1P13796 627 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 GABRR2P28476 465 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 SLC8A3P57103 927 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 CYP4F8P98187 520 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 TAF12Q16514 161 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 CLEC16AQ2KHT3 1053 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 LEXMQ3ZCV2 418 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms