RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 SHDQ96IW2 340 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 SPATA17Q96L03 361 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 BCO2Q9BYV7 579 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 HPS4Q9NQG7 708 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 RYDENQ9NUL5 291 aaKnown RBP13.34□□□□□ -0.27
ABCF1-204ENST00000468958 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 PIAS3Q9Y6X2 628 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 ATG2BQ96BY7 2078 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 EML5Q05BV3 1969 aa13.34□□□□□ -0.27
ABCF1-204ENST00000468958 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
ABCF1-204ENST00000468958 CCDC130P13994 396 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 NDST1P52848 882 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 DENND5BQ6ZUT9 1274 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 FAM35AQ86V20 835 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 CREBRFQ8IUR6 639 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 TRIM59Q8IWR1 403 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 ARL14EPQ8N8R7 260 aaPredicted RBP13.33□□□□□ -0.28
ABCF1-204ENST00000468958 C12orf29Q8N999 325 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 WHAMMQ8TF30 809 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 CLDN23Q96B33 292 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 C8orf48Q96LL4 319 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 FAM81BQ96LP2 452 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 GCNAQ96QF7 691 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 TTLL2Q9BWV7 592 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
ABCF1-204ENST00000468958 NFE2L3Q9Y4A8 694 aa13.33□□□□□ -0.28
ABCF1-204ENST00000468958 SYCE3A1L190 88 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 BECN2A8MW95 431 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 TNFRSF10BO14763 440 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 DDX6P26196 483 aaKnown RBP eCLIP13.32□□□□□ -0.283e-9■□□□□ 10.4
ABCF1-204ENST00000468958 HOXC13P31276 330 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 NBL1P41271 181 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 FMO5P49326 533 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 PGFP49763 221 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 YWHAEP62258 255 aaKnown RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 NOP14P78316 857 aaKnown RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 GAS6Q14393 721 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ZNF77Q15935 545 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 CBWD6Q4V339 395 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ARHGAP29Q52LW3 1261 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 CBWD3Q5JTY5 395 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 CBWD5Q5RIA9 395 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ASCL5Q7RTU5 278 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 C1orf210Q8IVY1 113 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 YAF2Q8IY57 180 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 CELF5Q8N6W0 485 aaKnown RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 MRPS31Q92665 395 aaKnown RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 SMOQ99835 787 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 FAM83CQ9BQN1 747 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 RAB20Q9NX57 234 aa13.32□□□□□ -0.28
ABCF1-204ENST00000468958 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
ABCF1-204ENST00000468958 GTPBP10A4D1E9 387 aaKnown RBP13.31□□□□□ -0.28
ABCF1-204ENST00000468958 KCNJ18B7U540 433 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 PROB1E7EW31 1015 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 SPECC1L-ADORA2AF8WAN1 911 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 DPYSL4O14531 572 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 TRIM66O15016 1216 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 CHRNB1P11230 501 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ARSAP15289 507 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
ABCF1-204ENST00000468958 CTHP32929 405 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ZNF165P49910 485 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 INCA1Q0VD86 236 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
ABCF1-204ENST00000468958 USP4Q13107 963 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 KCNJ12Q14500 433 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 NAIF1Q69YI7 327 aaPredicted RBP13.31□□□□□ -0.28
ABCF1-204ENST00000468958 SMYD5Q6GMV2 418 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ZNF852Q6ZMS4 543 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 SCAMP5Q8TAC9 235 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 FAM3CQ92520 227 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 TATDN2Q93075 761 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ARID3AQ99856 593 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 NIF3L1Q9GZT8 377 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 RNF38Q9H0F5 515 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 CYP3A43Q9HB55 503 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 GKN1Q9NS71 199 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 RBM12Q9NTZ6 932 aaKnown RBP13.31□□□□□ -0.28
ABCF1-204ENST00000468958 FAM49BQ9NUQ9 324 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 COQ4Q9Y3A0 265 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 R4GN57 208 aa13.31□□□□□ -0.28
ABCF1-204ENST00000468958 ZNF840PA6NDX5 716 aa13.3□□□□□ -0.28
ABCF1-204ENST00000468958 SOBPA7XYQ1 873 aa13.3□□□□□ -0.28
ABCF1-204ENST00000468958 OLFM2O95897 454 aa13.3□□□□□ -0.28
ABCF1-204ENST00000468958 SP9P0CG40 484 aa13.3□□□□□ -0.28
ABCF1-204ENST00000468958 CD58P19256 250 aa13.3□□□□□ -0.28
ABCF1-204ENST00000468958 CDK11BP21127 795 aaKnown RBP13.3□□□□□ -0.28
ABCF1-204ENST00000468958 ANXA13P27216 316 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms