RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 UPP2O95045 317 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 KRT7P08729 469 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 SDC4P31431 198 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 BCAR1P56945 870 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 TMCO3Q6UWJ1 677 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 POLNQ7Z5Q5 900 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 SIX6OS1Q8N1H7 587 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 ARFGAP1Q8N6T3 406 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 CCDC26Q8TAB7 109 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 RUBCNQ92622 972 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 KHSRPQ92945 711 aaKnown RBP eCLIP19.9■□□□□ 0.783e-15■■■■■ 43.1
SMC4-209ENST00000468653 TMEM209Q96SK2 561 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 SMOQ99835 787 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 ZWILCHQ9H900 591 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 KLHL11Q9NVR0 708 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 TSC2P49815 1807 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 TCRBV7S2A1N4TA0A589 114 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 DPYSL4O14531 572 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 RAD51CO43502 376 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 SLC11A1P49279 550 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 CCDC14Q49A88 953 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 EFHC1Q5JVL4 640 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 TXNRD3NBQ6F5E7 133 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 CFAP57Q96MR6 1250 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 HINFPQ9BQA5 517 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 PLEKHA4Q9H4M7 779 aa19.9■□□□□ 0.78
SMC4-209ENST00000468653 PI4K2BG5E9Z4 385 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 SYN3O14994 580 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 PHF2O75151 1096 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 HEXIM1O94992 359 aaKnown RBP19.89■□□□□ 0.77
SMC4-209ENST00000468653 TIMP1P01033 207 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 RALAP11233 206 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 CAPN2P17655 700 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 MIPP30301 263 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 PCK1P35558 622 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 ATP11AP98196 1134 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 SLC25A11Q02978 314 aaKnown RBP19.89■□□□□ 0.77
SMC4-209ENST00000468653 CDO1Q16878 200 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 C15orf59Q2T9L4 293 aaPredicted RBP19.89■□□□□ 0.77
SMC4-209ENST00000468653 MAATS1Q7Z4T9 603 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 LRRTM3Q86VH5 581 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 LRRC43Q8N309 656 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 PRELID2Q8N945 189 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 MAGOHBQ96A72 148 aaKnown RBP19.89■□□□□ 0.77
SMC4-209ENST00000468653 KCNK16Q96T55 309 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 PKMYT1Q99640 499 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 TMEM175Q9BSA9 504 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 OSBPL8Q9BZF1 889 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 TMLHEQ9NVH6 421 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 HCSTQ9UBK5 93 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 PCSK1NQ9UHG2 260 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 AMACRQ9UHK6 382 aa19.89■□□□□ 0.77
SMC4-209ENST00000468653 KIAA0100Q14667 2235 aaKnown RBP19.89■□□□□ 0.77
SMC4-209ENST00000468653 LRRD1A4D1F6 860 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 OAZ2O95190 189 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 RARAP10276 462 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 BDNFP23560 247 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 IL1R2P27930 398 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 TKTL1P51854 596 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 SH3PXD2AQ5TCZ1 1133 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 FAM171A1Q5VUB5 890 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 ARCQ7LC44 396 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 CEP57Q86XR8 500 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 FAM149B1Q96BN6 582 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 ACSF2Q96CM8 615 aaPredicted RBP19.88■□□□□ 0.77
SMC4-209ENST00000468653 SLITRK1Q96PX8 696 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 HEMGNQ9BXL5 484 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 RHOBTB2Q9BYZ6 727 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 UBXN6Q9BZV1 441 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 ARFGAP3Q9NP61 516 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 USP18Q9UMW8 372 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 FBXO21O94952 628 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 RAG1P15918 1043 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 CHRNA3P32297 505 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 CACNA2D1P54289 1103 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 COPS2P61201 443 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 MRPS5P82675 430 aaKnown RBP19.88■□□□□ 0.77
SMC4-209ENST00000468653 SMTNL2Q2TAL5 461 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 C4orf50Q6ZRC1 276 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 SPATA2LQ8IUW3 424 aaPredicted RBP19.88■□□□□ 0.77
SMC4-209ENST00000468653 IFT20Q8IY31 132 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 ZDHHC14Q8IZN3 488 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 ZMIZ2Q8NF64 920 aa19.88■□□□□ 0.77
SMC4-209ENST00000468653 NGRNQ9NPE2 291 aaKnown RBP19.88■□□□□ 0.77
SMC4-209ENST00000468653 SF3B1O75533 1304 aaKnown RBP eCLIP19.87■□□□□ 0.777e-33■■■■■ 320.9
SMC4-209ENST00000468653 ABHD14A-ACY1A0A1B0GW23 586 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 TRIM43BA6NCK2 446 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 HSF2BPO75031 334 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 TRUB2O95900 331 aaKnown RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 GALTP07902 379 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 GLI1P08151 1106 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 NDUFV1P49821 464 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 RABGGTBP53611 331 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 GUCY2DQ02846 1103 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 ADCY1Q08828 1119 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 SIX1Q15475 284 aaPredicted RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 VARS2Q5ST30 1063 aaKnown RBP19.87■□□□□ 0.77
SMC4-209ENST00000468653 MFSD7Q6UXD7 560 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 SPOCD1Q6ZMY3 1216 aa19.87■□□□□ 0.77
SMC4-209ENST00000468653 DCP1BQ8IZD4 617 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms