RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RAP1GAPP47736 663 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 MLLT6P55198 1093 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 ARHGAP29Q52LW3 1261 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 KRT39Q6A163 491 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 ANKRD40Q6AI12 368 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 DENND5BQ6ZUT9 1274 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 UNC93AQ86WB7 457 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 TAS1R2Q8TE23 839 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 DHTKD1Q96HY7 919 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-203ENST00000468565 NELL2Q99435 816 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 B3GNT5Q9BYG0 378 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 PDCL3Q9H2J4 239 aa15.37■□□□□ 0.05
COL27A1-203ENST00000468565 FANCMQ8IYD8 2048 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 CACNA1IQ9P0X4 2223 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 MAN2B1O00754 1011 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 GLULP15104 373 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 CCNE1P24864 410 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 AVPR1AP37288 418 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 PMS1P54277 932 aaKnown RBP15.36■□□□□ 0.05
COL27A1-203ENST00000468565 NOP14P78316 857 aaKnown RBP15.36■□□□□ 0.05
COL27A1-203ENST00000468565 ZNF268Q14587 947 aaPredicted RBP15.36■□□□□ 0.05
COL27A1-203ENST00000468565 SPOPLQ6IQ16 392 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 MAB21L3Q8N8X9 362 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 BPIFB1Q8TDL5 484 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 ELMO3Q96BJ8 720 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 MSANTD3Q96H12 275 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 FAXDC2Q96IV6 333 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 TTLL2Q9BWV7 592 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 KIF9Q9HAQ2 790 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 CYP3A43Q9HB55 503 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 MRPS17Q9Y2R5 130 aaKnown RBP15.36■□□□□ 0.05
COL27A1-203ENST00000468565 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
COL27A1-203ENST00000468565 MYO16Q9Y6X6 1858 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 F8VP50 259 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 MAGEA9P43362 315 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 TXNDC8Q6A555 127 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 FOXR2Q6PJQ5 311 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 CRYBG2Q8N1P7 616 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 CSGALNACT1Q8TDX6 532 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 LRRC3BQ96PB8 259 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 TRIM49BA6NDI0 452 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 SHISA7A6NL88 538 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 H0Y858 1186 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 DCNP07585 359 aaKnown RBP15.35■□□□□ 0.05
COL27A1-203ENST00000468565 PFKLP17858 780 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 CDK11BP21127 795 aaKnown RBP15.35■□□□□ 0.05
COL27A1-203ENST00000468565 MXI1P50539 228 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 INCA1Q0VD86 236 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 UBXN2BQ14CS0 331 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 C1orf228Q6PIY5 440 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 GPIHBP1Q8IV16 184 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 VSTM4Q8IW00 320 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 CCDC112Q8NEF3 446 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 EEF2KMTQ96G04 330 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 NIF3L1Q9GZT8 377 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 APOBEC3GQ9HC16 384 aaKnown RBP15.35■□□□□ 0.05
COL27A1-203ENST00000468565 THG1LQ9NWX6 298 aaKnown RBP15.35■□□□□ 0.05
COL27A1-203ENST00000468565 NFE2L3Q9Y4A8 694 aa15.35■□□□□ 0.05
COL27A1-203ENST00000468565 KIF2AO00139 706 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 CLDN5O00501 218 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 NCAM2O15394 837 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 TARSP26639 723 aaKnown RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 PPP3CCP48454 512 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 NDST1P52848 882 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 CACNA2D1P54289 1103 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 ACOT1Q86TX2 421 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 FAM35AQ86V20 835 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 ATOH1Q92858 354 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 USP13Q92995 863 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 SMARCD1Q96GM5 515 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 SMG9Q9H0W8 520 aaKnown RBP15.34■□□□□ 0.05
COL27A1-203ENST00000468565 TDP1Q9NUW8 608 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 TMEM30AQ9NV96 361 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 PIAS3Q9Y6X2 628 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 PIEZO1Q92508 2521 aa15.34■□□□□ 0.05
COL27A1-203ENST00000468565 TRAV19A0A0A6YYK7 116 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 FAM170BA6NMN3 283 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.05
COL27A1-203ENST00000468565 CD72P21854 359 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 PDE6CP51160 858 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 USP46P62068 366 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 ANGPT1Q15389 498 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 PAQR9Q6ZVX9 377 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 MTERF4Q7Z6M4 381 aaKnown RBP15.33■□□□□ 0.05
COL27A1-203ENST00000468565 FBXL13Q8NEE6 735 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 CLDN23Q96B33 292 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 CEP63Q96MT8 703 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.05
COL27A1-203ENST00000468565 GCNT4Q9P109 453 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.05
COL27A1-203ENST00000468565 MTF2Q9Y483 593 aaPredicted RBP15.33■□□□□ 0.05
COL27A1-203ENST00000468565 BICDL2A1A5D9 508 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 CCP110O43303 1012 aa15.33■□□□□ 0.04
COL27A1-203ENST00000468565 LRRN2O75325 713 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms