RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 KANSL3Q9P2N6 904 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CDH9Q9ULB4 789 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 STRIP2Q9ULQ0 834 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 PCDHB8Q9UN66 801 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 FAN1Q9Y2M0 1017 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 GREB1Q4ZG55 1949 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CFAP69A5D8W1 941 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 C3orf70A6NLC5 250 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 C2CD4BA6NLJ0 364 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 BHMG1C9JSJ3 638 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MYO1FO00160 1098 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 OAZ2O95190 189 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ECEL1O95672 775 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 SETSIPP0DME0 302 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ODC1P11926 461 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CSF2RAP15509 400 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 TFE3P19532 575 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 EN2P19622 333 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 IL1R2P27930 398 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 SLC1A1P43005 524 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 SLC25A11Q02978 314 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ATP13A4Q4VNC1 1196 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 RAB41Q5JT25 222 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 ICE2Q659A1 982 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 DNAJC24Q6P3W2 148 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MMGT1Q8N4V1 131 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MSANTD4Q8NCY6 345 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 FNIP1Q8TF40 1166 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 HDAC7Q8WUI4 952 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 TNIP3Q96KP6 325 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 GPR62Q9BZJ7 368 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 RABL2BQ9UNT1 228 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 PLXNA3P51805 1871 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 DYTNA2CJ06 578 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CTAGE15A4D2H0 777 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MIF4GDA9UHW6 222 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 GOLGA8SH3BPF8 625 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 XPO1O14980 1071 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 TBC1D4O60343 1298 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CTAGE8P0CG41 777 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 KRT3P12035 628 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 TYMPP19971 482 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 PBX3P40426 434 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 BCAT1P54687 386 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 INTS6LQ5JSJ4 861 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 TAS1R1Q7RTX1 841 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CTAGE6Q86UF2 777 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 CTAGE4Q8IX94 777 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 RNF168Q8IYW5 571 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 MNS1Q8NEH6 495 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 NDRG1Q92597 394 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 GOLGA1Q92805 767 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 RNPC3Q96LT9 517 aaKnown RBP8.69□□□□□ -1.02
BRCA1-208ENST00000468300 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.69□□□□□ -1.026e-6■■□□□ 12.9
BRCA1-208ENST00000468300 RNF14Q9UBS8 474 aa8.69□□□□□ -1.02
BRCA1-208ENST00000468300 LRCH4O75427 683 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 VNN2O95498 520 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 GALTP07902 379 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 LINC00271P0C7V0 271 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 H2AFXP16104 143 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-208ENST00000468300 RFC2P35250 354 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 NDUFV1P49821 464 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 DEFB103AP81534 67 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CCDC14Q49A88 953 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 OTUD1Q5VV17 481 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-208ENST00000468300 RSPO2Q6UXX9 243 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-208ENST00000468300 BNIPLQ7Z465 357 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 PIGZQ86VD9 579 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 URGCPQ8TCY9 931 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 KCTD13Q8WZ19 329 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 TOP1MTQ969P6 601 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 B3GALT6Q96L58 329 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 PEBP4Q96S96 227 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 MCOLN1Q9GZU1 580 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 WDR35Q9P2L0 1181 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 IP6K2Q9UHH9 426 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CDH23Q9H251 3354 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 LAMA3Q16787 3333 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CCDC66A2RUB6 948 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CEP104O60308 925 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 NPR3P17342 541 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 FGFR3P22607 806 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 OR1G1P47890 313 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 SLC6A3Q01959 620 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 TAP1Q03518 808 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 CFAP221Q4G0U5 840 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 SELENOOQ9BVL4 669 aa8.68□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF638Q14966 1978 aaKnown RBP8.68□□□□□ -1.02
BRCA1-208ENST00000468300 GRAP2O75791 330 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 FYNP06241 537 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 MRPS25P82663 173 aaKnown RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 CKAP4Q07065 602 aaKnown RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ADCY2Q08462 1091 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 TEX35Q5T0J7 233 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 NECAB2Q7Z6G3 386 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms