RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 ST7Q9NRC1 585 aa16.04■□□□□ 0.16
SNIP1-202ENST00000468040 UXTQ9UBK9 157 aaPredicted RBP16.04■□□□□ 0.16
SNIP1-202ENST00000468040 FGF19O95750 216 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 PLEKP08567 350 aaPredicted RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 UNGP13051 313 aaPredicted RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 FECHP22830 423 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 YWHAQP27348 245 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 LTBRP36941 435 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 NSFP46459 744 aaKnown RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 RPL34P49207 117 aaKnown RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 RGS7P49802 495 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 CENPCQ03188 943 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 CLEC16AQ2KHT3 1053 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 RAB41Q5JT25 222 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 RARS2Q5T160 578 aaKnown RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 PMF1Q6P1K2 205 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 SIX6OS1Q8N1H7 587 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 WDTC1Q8N5D0 677 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 C12orf76Q8N812 135 aaPredicted RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 PPM1EQ8WY54 764 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 SMG7Q92540 1137 aaKnown RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 ZNF707Q96C28 371 aaPredicted RBP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 PPP1R13BQ96KQ4 1090 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 MYRFLQ96LU7 910 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 CCDC42Q96M95 316 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 PCDHB18PQ96TA0 734 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.03■□□□□ 0.16
SNIP1-202ENST00000468040 TTLL2Q9BWV7 592 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 SLC4A5Q9BY07 1137 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 ADAM7Q9H2U9 754 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 SYNCQ9H7C4 482 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 ASAH2Q9NR71 780 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 ADAMTS1Q9UHI8 967 aa16.03■□□□□ 0.16
SNIP1-202ENST00000468040 DDX3XO00571 662 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 AKR1B10O60218 316 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 GZMAP12544 262 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 HMGA1P17096 107 aaKnown RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 PTPN2P17706 415 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 EIF4A3P38919 411 aaKnown RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 TKTL1P51854 596 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 KIF11P52732 1056 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 DLX2Q07687 328 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 ADIGQ0VDE8 80 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 GPRIN1Q7Z2K8 1008 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CCDC186Q7Z3E2 898 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 TMEM110Q86TL2 294 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 ERICH1Q86X53 443 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 TMTC1Q8IUR5 882 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 SCAMP5Q8TAC9 235 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 SLC30A5Q8TAD4 765 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 OLIG1Q8TAK6 271 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CPA5Q8WXQ8 436 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 PDLIM2Q96JY6 352 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 MSLNLQ96KJ4 702 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 SLITRK1Q96PX8 696 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CHP1Q99653 195 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 BAG1Q99933 345 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 UBE2ZQ9H832 354 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CNGB3Q9NQW8 809 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 IL37Q9NZH6 218 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 CYTH4Q9UIA0 394 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 MAGED2Q9UNF1 606 aaPredicted RBP16.02■□□□□ 0.16
SNIP1-202ENST00000468040 USP3Q9Y6I4 520 aa16.02■□□□□ 0.16
SNIP1-202ENST00000468040 NCANO14594 1321 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.01■□□□□ 0.15
SNIP1-202ENST00000468040 FAM92AA1XBS5 289 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
SNIP1-202ENST00000468040 FBXO21O94952 628 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 MMP8P22894 467 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 PPP3CCP48454 512 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 EPHA5P54756 1037 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 IFRD2Q12894 506 aaPredicted RBP16.01■□□□□ 0.15
SNIP1-202ENST00000468040 MTMR3Q13615 1198 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 SLC18A3Q16572 532 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 PTPN20Q4JDL3 420 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 CYP4A22Q5TCH4 519 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 ACAD10Q6JQN1 1059 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 PHF13Q86YI8 300 aaPredicted RBP16.01■□□□□ 0.15
SNIP1-202ENST00000468040 ZDHHC17Q8IUH5 632 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 CCDC170Q8IYT3 715 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 SCML4Q8N228 414 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 STKLD1Q8NE28 680 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 PDZD8Q8NEN9 1154 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 OVCA2Q8WZ82 227 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 HLA-CQ95604 372 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 RIPOR3Q96MK2 946 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 GCNAQ96QF7 691 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 CPXM1Q96SM3 734 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 APOL5Q9BWW9 433 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 S1PR5Q9H228 398 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 CD207Q9UJ71 328 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 COG5Q9UP83 839 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 SCML2Q9UQR0 700 aa16.01■□□□□ 0.15
SNIP1-202ENST00000468040 SZT2Q5T011 3432 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms