RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FBXO38Q6PIJ6 1188 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 MTSS1LQ765P7 747 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 EXD1Q8NHP7 514 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 IGDCC4Q8TDY8 1250 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 ECSITQ9BQ95 431 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 YIPF3Q9GZM5 350 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 EVA1BQ9NVM1 165 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 WNT10BO00744 389 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 CKMP06732 381 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 ATN1P54259 1190 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 PPATQ06203 517 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 AMHR2Q16671 573 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 LONRF1Q17RB8 773 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 MRNIPQ6NTE8 343 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 SETD3Q86TU7 594 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 LONP2Q86WA8 852 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 CENPLQ8N0S6 344 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 DDI1Q8WTU0 396 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 THAP11Q96EK4 314 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 AHCYL2Q96HN2 611 aaKnown RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 FAM167BQ9BTA0 163 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 GPRC5DQ9NZD1 345 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 TRPM5Q9NZQ8 1165 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 MARCOQ9UEW3 520 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 V9GYQ6 96 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 CAMTA1Q9Y6Y1 1673 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 NBNO60934 754 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 PCDH8O95206 1070 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 GYS2P54840 703 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 DEFA1P59665 94 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 DEFA3P59666 94 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 PLOD1Q02809 727 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 FAR2Q96K12 515 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 MAP3K14Q99558 947 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 MFSD1Q9H3U5 465 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 STMN3Q9NZ72 180 aa9.02□□□□□ -0.97
HPS4-209ENST00000466781 AKAP7Q9P0M2 348 aaPredicted RBP9.02□□□□□ -0.97
HPS4-209ENST00000466781 IFRD1O00458 451 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 STRNO43815 780 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 FKTNO75072 461 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 RPLP2P05387 115 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 NFICP08651 508 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SNRPAP09012 282 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 EPHB2P29323 1055 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 INHBEP58166 350 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PPIL2Q13356 520 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DDX39BQ13838 428 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 PGS1Q32NB8 556 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ZNF484Q5JVG2 852 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 WLSQ5T9L3 541 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 UNC45BQ8IWX7 931 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ACER1Q8TDN7 264 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 UBXN6Q9BZV1 441 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CCDC134Q9H6E4 229 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 LRRC4BQ9NT99 713 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 GRID1Q9ULK0 1009 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ARL2BPQ9Y2Y0 163 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 AAR2Q9Y312 384 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 CDY2AQ9Y6F7 541 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CDY1Q9Y6F8 540 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 RHOCP08134 193 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 VIL1P09327 827 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 SUPT20HL2P0C7V6 817 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 MYL4P12829 197 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 TCN1P20061 433 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 MUTP22033 750 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 CENPCQ03188 943 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 OTOAQ7RTW8 1153 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SAMD3Q8N6K7 520 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 RDM1Q8NG50 284 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CSGALNACT1Q8TDX6 532 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SLC20A1Q8WUM9 679 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 C7orf25Q9BPX7 421 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PHF20Q9BVI0 1012 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 KCNQ5Q9NR82 932 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 IMPAD1Q9NX62 359 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SMARCAL1Q9NZC9 954 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PMPCBO75439 489 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CLK1P49759 484 aaKnown RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 PTPAQ15257 358 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 SHC4Q6S5L8 630 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 CDR2LQ86X02 465 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 FBXO16Q8IX29 292 aaPredicted RBP9.01□□□□□ -0.97
HPS4-209ENST00000466781 CLYBLQ8N0X4 340 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DDIT4Q9NX09 232 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 TAF6LQ9Y6J9 622 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 TMEM88BA6NKF7 163 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 TEX33O43247 280 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 DGKIO75912 1065 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 ATP6V1C1P21283 382 aa9.01□□□□□ -0.97
HPS4-209ENST00000466781 JAK1P23458 1154 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms