RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 TPRG1Q6ZUI0 275 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 RRAGAQ7L523 313 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 BMP8AQ7Z5Y6 402 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 ARHGEF19Q8IW93 802 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 TRIM59Q8IWR1 403 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CMTM8Q8IZV2 173 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 NUP93Q8N1F7 819 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 ARL14EPQ8N8R7 260 aaPredicted RBP10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 TMEM105Q8N8V8 129 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 WHAMMQ8TF30 809 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 DEPDC1BQ8WUY9 529 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 FBXO32Q969P5 355 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 TRMT2BQ96GJ1 504 aaKnown RBP10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 SPATA17Q96L03 361 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 C8orf48Q96LL4 319 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 MED15Q96RN5 788 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CYP2S1Q96SQ9 504 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 SMOQ99835 787 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 FOXQ1Q9C009 403 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC2A4RGQ9NR83 387 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 WNT16Q9UBV4 365 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 DACH1Q9UI36 760 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 CCL26Q9Y258 94 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 COQ4Q9Y3A0 265 aa10.32□□□□□ -0.76
RTFDC1-205ENST00000466260 ZNF318Q5VUA4 2279 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 TRAV19A0A0A6YYK7 116 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SCAMP3O14828 347 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 PI15O43692 258 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CALCAP01258 141 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 TPM3P06753 285 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 DCNP07585 359 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 PRKCSHP14314 528 aaPredicted RBP10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CD19P15391 556 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 NPR3P17342 541 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 DDX6P26196 483 aaKnown RBP eCLIP10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SOX9P48436 509 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 PFKPQ01813 784 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC44A4Q53GD3 710 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 TRIM68Q6AZZ1 485 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SASS6Q6UVJ0 657 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CLEC20AQ6ZU45 233 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 GPRIN1Q7Z2K8 1008 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 MFSD6LQ8IWD5 586 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CRYBG2Q8N1P7 616 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC4A11Q8NBS3 891 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 ZMIZ2Q8NF64 920 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SCAMP5Q8TAC9 235 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 BPIFB1Q8TDL5 484 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CSGALNACT1Q8TDX6 532 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 TMEM176AQ96HP8 235 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 SLC22A12Q96S37 553 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 CRACR2AQ9BSW2 395 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 DNAI2Q9GZS0 605 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 TRPM5Q9NZQ8 1165 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 GCNT4Q9P109 453 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 NDRG2Q9UN36 371 aaKnown RBP10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 PCDHB4Q9Y5E5 795 aa10.31□□□□□ -0.76
RTFDC1-205ENST00000466260 ATG2BQ96BY7 2078 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 MYOFQ9NZM1 2061 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 USP17L7P0C7H9 530 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 ACO1P21399 889 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 TBXAS1P24557 533 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 YWHAQP27348 245 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 AVPR2P30518 371 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 KPNA1P52294 538 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 RAD23BP54727 409 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 MARSP56192 900 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 YWHAEP62258 255 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 TNK2Q07912 1038 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 GJB7Q6PEY0 223 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 FOXR2Q6PJQ5 311 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 TMEM270Q6UE05 265 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 MON1AQ86VX9 555 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 CELF5Q8N6W0 485 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 RIN3Q8TB24 985 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 IRF7Q92985 503 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 USP13Q92995 863 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 E2F7Q96AV8 911 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 PDLIM2Q96JY6 352 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 MYRFLQ96LU7 910 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 LRRC3BQ96PB8 259 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 INTS2Q9H0H0 1204 aaKnown RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 TRPV4Q9HBA0 871 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 TDP1Q9NUW8 608 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 SMPD4Q9NXE4 827 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 GTSE1Q9NYZ3 720 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 GMIPQ9P107 970 aa10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 CHORDC1Q9UHD1 332 aaPredicted RBP10.3□□□□□ -0.76
RTFDC1-205ENST00000466260 IRF1P10914 325 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 MBL2P11226 248 aaPredicted RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 KRT5P13647 590 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 HDCP19113 662 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 AOC1P19801 751 aa10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 BRD2P25440 801 aaKnown RBP10.29□□□□□ -0.76
RTFDC1-205ENST00000466260 TERF1P54274 439 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms