RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 USP3Q9Y6I4 520 aa11.76□□□□□ -0.53
VCP-204ENST00000466100 TCRBV5S1A1TA0A578 114 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 FAM170AA1A519 330 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 FAM92AA1XBS5 289 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 E5RJQ4 531 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 PRRG1O14668 218 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 RTN2O75298 545 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 ERBB2P04626 1255 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 C8AP07357 584 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 POU2F2P09086 479 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 HOXA9P31269 272 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 ELF1P32519 619 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 CYLC1P35663 651 aaPredicted RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 SLC5A3P53794 718 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 GSCP56915 257 aaPredicted RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 SLC8A3P57103 927 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 USP46P62068 366 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 RPL10AP62906 217 aaKnown RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 TWF1Q12792 350 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 PPP1R2P3Q6NXS1 205 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 TMEM184AQ6ZMB5 413 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 CCDC149Q6ZUS6 474 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 TOGARAM2Q6ZUX3 1019 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 Q7L0L9 218 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 PPP1R13BQ96KQ4 1090 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 FAM161BQ96MY7 647 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 ZNF830Q96NB3 372 aaPredicted RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.75□□□□□ -0.53
VCP-204ENST00000466100 TTLL2Q9BWV7 592 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 DEF6Q9H4E7 631 aa11.75□□□□□ -0.53
VCP-204ENST00000466100 HELZP42694 1942 aaKnown RBP11.75□□□□□ -0.53
VCP-204ENST00000466100 DOCK8Q8NF50 2099 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 SLC38A8A6NNN8 435 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 TMCO5BA8MYB1 307 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 PAPSS1O43252 624 aaPredicted RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 ZMYND10O75800 440 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 FTLP02792 175 aaPredicted RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 HMGA1P17096 107 aaKnown RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 NSFP46459 744 aaKnown RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 ADIGQ0VDE8 80 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 MTMR3Q13615 1198 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 CTC1Q2NKJ3 1217 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 C2CD6Q53TS8 623 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 LIN9Q5TKA1 542 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 MMS22LQ6ZRQ5 1243 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 XYLT1Q86Y38 959 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 MCOLN2Q8IZK6 566 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 NUP93Q8N1F7 819 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 SCML4Q8N228 414 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 ACRBPQ8NEB7 543 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 FEZF2Q8TBJ5 459 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 PPP2R3CQ969Q6 453 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 ZNF707Q96C28 371 aaPredicted RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 PIWIL1Q96J94 861 aaKnown RBP11.74□□□□□ -0.53
VCP-204ENST00000466100 VCPIP1Q96JH7 1222 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 GUCD1Q96NT3 240 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 NOX5Q96PH1 765 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 C11orf70Q9BRQ4 267 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 ZDHHC7Q9NXF8 308 aa11.74□□□□□ -0.53
VCP-204ENST00000466100 PIK3R2O00459 728 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 LINC01565O15544 149 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 RFPL2O75678 378 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CALB1P05937 261 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 HNRNPA1P09651 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
VCP-204ENST00000466100 ACADSBP45954 432 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ALDH1A3P47895 512 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 TKTL1P51854 596 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 GALCP54803 685 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 DAOAP59103 153 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 PLD1Q13393 1074 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ADAM15Q13444 863 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CYP4A22Q5TCH4 519 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 PM20D1Q6GTS8 502 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 LLGL2Q6P1M3 1020 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 DENND5BQ6ZUT9 1274 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 FAM183BPQ6ZVS7 135 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ERICH1Q86X53 443 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 TMC8Q8IU68 726 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CMASQ8NFW8 434 aaPredicted RBP11.73□□□□□ -0.53
VCP-204ENST00000466100 IPO4Q8TEX9 1081 aaKnown RBP11.73□□□□□ -0.53
VCP-204ENST00000466100 GIPC2Q8TF65 315 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CLEC4CQ8WTT0 213 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CASP10Q92851 521 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 PSMG2Q969U7 264 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 C18orf8Q96DM3 657 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 TRMT2BQ96GJ1 504 aaKnown RBP11.73□□□□□ -0.53
VCP-204ENST00000466100 MYRFLQ96LU7 910 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 DESI2Q9BSY9 194 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 LRRC3Q9BY71 257 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 ULBP1Q9BZM6 244 aa11.73□□□□□ -0.53
VCP-204ENST00000466100 CNGB3Q9NQW8 809 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms