RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 TDGF1P13385 188 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 ZNF165P49910 485 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 CYP4F8P98187 520 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 PLCB2Q00722 1185 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 LRMPQ12912 555 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 NFE2Q16621 373 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-205ENST00000465238 TCP11X2Q5H9J9 407 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 RALGPS2Q86X27 583 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-205ENST00000465238 AOPEPQ8N6M6 819 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 GPR161Q8N6U8 529 aaKnown RBP18.83■□□□□ 0.6
COL7A1-205ENST00000465238 EHBP1Q8NDI1 1231 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 BPIFB1Q8TDL5 484 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 GIPC2Q8TF65 315 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.6
COL7A1-205ENST00000465238 TATDN2Q93075 761 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 RMDN1Q96DB5 314 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 LRRC3BQ96PB8 259 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 SDCBP2Q9H190 292 aa18.83■□□□□ 0.6
COL7A1-205ENST00000465238 SMG5Q9UPR3 1016 aaKnown RBP18.83■□□□□ 0.6
COL7A1-205ENST00000465238 SPECC1L-ADORA2AF8WAN1 911 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 PRAMEF12O95522 483 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 TPM2P07951 284 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 TRIM21P19474 475 aaKnown RBP18.82■□□□□ 0.6
COL7A1-205ENST00000465238 CDK11BP21127 795 aaKnown RBP18.82■□□□□ 0.6
COL7A1-205ENST00000465238 CXCL12P48061 93 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 CDR1P51861 262 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 MAPRE1Q15691 268 aaKnown RBP18.82■□□□□ 0.6
COL7A1-205ENST00000465238 CDKAL1Q5VV42 579 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 SPEM1Q8N4L4 309 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 CELF5Q8N6W0 485 aaKnown RBP18.82■□□□□ 0.6
COL7A1-205ENST00000465238 ANKRD20A12PQ8NF67 263 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 DNAI2Q9GZS0 605 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 THG1LQ9NWX6 298 aaKnown RBP18.82■□□□□ 0.6
COL7A1-205ENST00000465238 GTF3C4Q9UKN8 822 aa18.82■□□□□ 0.6
COL7A1-205ENST00000465238 ZNF638Q14966 1978 aaKnown RBP18.81■□□□□ 0.6
COL7A1-205ENST00000465238 PES1O00541 588 aaKnown RBP18.81■□□□□ 0.6
COL7A1-205ENST00000465238 ATP2C2O75185 946 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 PTPN1P18031 435 aaKnown RBP18.81■□□□□ 0.6
COL7A1-205ENST00000465238 CD58P19256 250 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 CTHP32929 405 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 SOX9P48436 509 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 PSMC1P62191 440 aaKnown RBP18.81■□□□□ 0.6
COL7A1-205ENST00000465238 VWA3BQ502W6 1294 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 DGKKQ5KSL6 1271 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 FAM171BQ6P995 826 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 GBP6Q6ZN66 633 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 C4orf50Q6ZRC1 276 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 UNC93AQ86WB7 457 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 SPATA2LQ8IUW3 424 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-205ENST00000465238 CMTM8Q8IZV2 173 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 TTC39CQ8N584 583 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 ZFYVE19Q96K21 471 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 TNIP3Q96KP6 325 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 SLC46A2Q9BY10 475 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 NDST4Q9H3R1 872 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 TMLHEQ9NVH6 421 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 GTSE1Q9NYZ3 720 aa18.81■□□□□ 0.6
COL7A1-205ENST00000465238 KIF26AQ9ULI4 1882 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 SOBPA7XYQ1 873 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 BECN2A8MW95 431 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CAVIN2O95810 425 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CSH1P0DML2 217 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CSH2P0DML3 217 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 HMGA1P17096 107 aaKnown RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 TBXAS1P24557 533 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 NDST1P52848 882 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 YWHAEP62258 255 aaKnown RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CUL2Q13617 745 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 GAS6Q14393 721 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 PUM1Q14671 1186 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 NCAPHQ15003 741 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 LMO3Q8TAP4 145 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 PKMYT1Q99640 499 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CRACR2AQ9BSW2 395 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 INTS2Q9H0H0 1204 aaKnown RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 FAM124BQ9H5Z6 455 aaPredicted RBP18.8■□□□□ 0.6
COL7A1-205ENST00000465238 ABCB6Q9NP58 842 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 CRTAC1Q9NQ79 661 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 TAB2Q9NYJ8 693 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 GCNT4Q9P109 453 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 NME7Q9Y5B8 376 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 DNAH14Q0VDD8 3507 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 OBSL1O75147 1896 aa18.8■□□□□ 0.6
COL7A1-205ENST00000465238 GTPBP10A4D1E9 387 aaKnown RBP18.79■□□□□ 0.6
COL7A1-205ENST00000465238 F11P03951 625 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 AVPR1AP37288 418 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 RPL10AP62906 217 aaKnown RBP18.79■□□□□ 0.6
COL7A1-205ENST00000465238 SATB1Q01826 763 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 CYP27A1Q02318 531 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 INCA1Q0VD86 236 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 KRT31Q15323 416 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 EXOC3L4Q17RC7 722 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 ITPRIPL2Q3MIP1 535 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 MDH1BQ5I0G3 518 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 MIIPQ5JXC2 388 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 TXNDC11Q6PKC3 985 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 TMEM150AQ86TG1 271 aa18.79■□□□□ 0.6
COL7A1-205ENST00000465238 PPM1KQ8N3J5 372 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms