RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 FAM49AQ9H0Q0 323 aaPredicted RBP7.45□□□□□ -1.22
VPS8-216ENST00000463687 WNT8AQ9H1J5 351 aa7.45□□□□□ -1.22
VPS8-216ENST00000463687 FBXO2Q9UK22 296 aaPredicted RBP7.45□□□□□ -1.22
VPS8-216ENST00000463687 DBR1Q9UK59 544 aaKnown RBP7.45□□□□□ -1.22
VPS8-216ENST00000463687 DNM3Q9UQ16 869 aa7.45□□□□□ -1.22
VPS8-216ENST00000463687 UMODL1Q5DID0 1318 aa7.45□□□□□ -1.22
VPS8-216ENST00000463687 KDM3AQ9Y4C1 1321 aa7.45□□□□□ -1.22
VPS8-216ENST00000463687 RBBP6Q7Z6E9 1792 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 M0QZ92 97 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 KDM1AO60341 852 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CXCL10P02778 98 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CSF2RAP15509 400 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 RHCEP18577 417 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 PREPP48147 710 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 MRPS6P82932 125 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 SMAD3P84022 425 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 RHDQ02161 417 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 GRIN1Q05586 938 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 MGAT3Q09327 533 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CDK5R2Q13319 367 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 GALEQ14376 348 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 SLC9A5Q14940 896 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 ZRSR1Q15695 479 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 HYIQ5T013 277 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CDPF1Q6NVV7 123 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 PSRC1Q6PGN9 363 aaPredicted RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 CABP7Q86V35 215 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CMIPQ8IY22 773 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 ZZZ3Q8IYH5 903 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 TMEM130Q8N3G9 435 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 LINC01465Q8N7H1 131 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 PIWIL2Q8TC59 973 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 TCTN2Q96GX1 697 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CDK5RAP3Q96JB5 506 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 MMTAG2Q9BU76 263 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 DHX33Q9H6R0 707 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 SP110Q9HB58 689 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 IL23AQ9NPF7 189 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 CCM2LQ9NUG4 571 aaPredicted RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 DDX19AQ9NUU7 478 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 DNAJC28Q9NX36 388 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 PPARGC1AQ9UBK2 798 aaKnown RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 KCNG1Q9UIX4 513 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 TIMM13Q9Y5L4 95 aaPredicted RBP7.44□□□□□ -1.22
VPS8-216ENST00000463687 TRPV2Q9Y5S1 764 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 SQORQ9Y6N5 450 aa7.44□□□□□ -1.22
VPS8-216ENST00000463687 A0A087WWV3 80 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 A0A1W2PPC1 479 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 SHISA3A0PJX4 238 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 ARHGEF35A5YM69 484 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 NBNO60934 754 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 ZRANB2O95218 330 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS8-216ENST00000463687 FGBP02675 491 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CHRNA1P02708 482 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 SETSIPP0DME0 302 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 ENDOUP21128 410 aaKnown RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 CD40P25942 277 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 HALP42357 657 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CLCN3P51790 818 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CRYBB1P53674 252 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 RPL11P62913 178 aaKnown RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 MBTPS1Q14703 1052 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 GPNMBQ14956 572 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 EMC2Q15006 297 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 GPR19Q15760 415 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 TMEM119Q4V9L6 283 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 FAM43BQ6ZT52 329 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 DEFB128Q7Z7B8 93 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 ZNF354CQ86Y25 554 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 LRRC71Q8N4P6 559 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 USP38Q8NB14 1042 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 MCPH1Q8NEM0 835 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 RASSF8Q8NHQ8 419 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 TCP11Q8WWU5 503 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 JADE3Q92613 823 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 APBB2Q92870 758 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CLIC6Q96NY7 704 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 ELF4Q99607 663 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 CCSER1Q9C0I3 900 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 SCAND2PQ9GZW5 306 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 BHMT2Q9H2M3 363 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 PRO3102Q9H379 93 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CLDND1Q9NY35 253 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 SUCLA2Q9P2R7 463 aaPredicted RBP7.43□□□□□ -1.22
VPS8-216ENST00000463687 CCDC39Q9UFE4 941 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 RCOR1Q9UKL0 485 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 CDY2AQ9Y6F7 541 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 LAMA3Q16787 3333 aa7.43□□□□□ -1.22
VPS8-216ENST00000463687 MYH6P13533 1939 aa7.42□□□□□ -1.22
VPS8-216ENST00000463687 MCM3APO60318 1980 aa7.42□□□□□ -1.22
VPS8-216ENST00000463687 E9PMD0 336 aa7.42□□□□□ -1.22
VPS8-216ENST00000463687 TPP1O14773 563 aa7.42□□□□□ -1.22
VPS8-216ENST00000463687 ASAP2O43150 1006 aa7.42□□□□□ -1.22
VPS8-216ENST00000463687 USO1O60763 962 aaKnown RBP7.42□□□□□ -1.22
VPS8-216ENST00000463687 CUTAO60888 179 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms