RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ALDH1A2O94788 518 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 ABL1P00519 1130 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 OAS1P00973 400 aaKnown RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 CST3P01034 146 aaPredicted RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 ZSCAN22P10073 491 aaPredicted RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 DLATP10515 647 aaKnown RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 PTPN1P18031 435 aaKnown RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 TNNI1P19237 187 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 HOXD13P35453 343 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 AMPD3Q01432 767 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 TAF10Q12962 218 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 SNRNP35Q16560 246 aaKnown RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 HSF5Q4G112 596 aaPredicted RBP21.07■□□□□ 0.96
VARS-221ENST00000463184 DDX42Q86XP3 938 aaKnown RBP eCLIP21.07■□□□□ 0.96
VARS-221ENST00000463184 CCDC33Q8N5R6 958 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 RDH13Q8NBN7 331 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 MDGA1Q8NFP4 955 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 ZNF507Q8TCN5 953 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 HPS3Q969F9 1004 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 PNKPQ96T60 521 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 TRIM9Q9C026 710 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 CUEDC2Q9H467 287 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 KBTBD4Q9NVX7 518 aa21.07■□□□□ 0.96
VARS-221ENST00000463184 PTPRDP23468 1912 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 A0A0A0MRY4 1105 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 NASPP49321 788 aaPredicted RBP21.06■□□□□ 0.96
VARS-221ENST00000463184 NOVA1P51513 510 aaKnown RBP21.06■□□□□ 0.96
VARS-221ENST00000463184 SNRPFP62306 86 aaKnown RBP21.06■□□□□ 0.96
VARS-221ENST00000463184 TNNC1P63316 161 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 WDR72Q3MJ13 1102 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 EPM2AIP1Q7L775 607 aaPredicted RBP21.06■□□□□ 0.96
VARS-221ENST00000463184 CYP2U1Q7Z449 544 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 ELOVL4Q9GZR5 314 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 SMPD4Q9NXE4 827 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 TBC1D14Q9P2M4 693 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 NME7Q9Y5B8 376 aa21.06■□□□□ 0.96
VARS-221ENST00000463184 APODP05090 189 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 BCKDHBP21953 392 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 SLC6A11P48066 632 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 PSMD6Q15008 389 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 E2F4Q16254 413 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 RHBDF2Q6PJF5 856 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 TMEM92Q6UXU6 159 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 OLIG1Q8TAK6 271 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 CGRRF1Q99675 332 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 POLMQ9NP87 494 aaPredicted RBP21.05■□□□□ 0.96
VARS-221ENST00000463184 TMEM9BQ9NQ34 198 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 AGPAT3Q9NRZ7 376 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 CFAP97Q9P2B7 532 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 NUP205Q92621 2012 aa21.05■□□□□ 0.96
VARS-221ENST00000463184 ZFHX4Q86UP3 3567 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 ANTXRLA6NF34 631 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 TGFB1I1O43294 461 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 KAT7O95251 611 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 STAU1O95793 577 aaKnown RBP21.04■□□□□ 0.96
VARS-221ENST00000463184 ADH1CP00326 375 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 F13A1P00488 732 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 MBL2P11226 248 aaPredicted RBP21.04■□□□□ 0.96
VARS-221ENST00000463184 DHPSP49366 369 aaPredicted RBP21.04■□□□□ 0.96
VARS-221ENST00000463184 ASIC1P78348 528 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 CYP24A1Q07973 514 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 STK38Q15208 465 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 CNNM4Q6P4Q7 775 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 TTC30AQ86WT1 665 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 NUP93Q8N1F7 819 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 ALLCQ8N6M5 410 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 IL17RCQ8NAC3 791 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 TXNDC5Q8NBS9 432 aaKnown RBP21.04■□□□□ 0.96
VARS-221ENST00000463184 LINC00301Q8NCQ3 95 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 PDZD8Q8NEN9 1154 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 OVCA2Q8WZ82 227 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 ZNF518BQ9C0D4 1074 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 DPEP3Q9H4B8 488 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 THADAQ6YHU6 1953 aa21.04■□□□□ 0.96
VARS-221ENST00000463184 A8MXQ7 604 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.03■□□□□ 0.96
VARS-221ENST00000463184 RTN3O95197 1032 aaPredicted RBP21.03■□□□□ 0.96
VARS-221ENST00000463184 KLF8O95600 359 aaPredicted RBP21.03■□□□□ 0.96
VARS-221ENST00000463184 YWHAQP27348 245 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 ATICP31939 592 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 TIE1P35590 1138 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 GRIA2P42262 883 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 TNFRSF4P43489 277 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 CACNA2D1P54289 1103 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 TRPC3Q13507 836 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 PKP1Q13835 747 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 EOGTQ5NDL2 527 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 FAM26FQ5R3K3 315 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 SH3PXD2AQ5TCZ1 1133 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 FOXD4L5Q5VV16 416 aaPredicted RBP21.03■□□□□ 0.96
VARS-221ENST00000463184 IQUBQ8NA54 791 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 XXYLT1Q8NBI6 393 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 B3GALNT2Q8NCR0 500 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 WHAMMQ8TF30 809 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 FOXD4L4Q8WXT5 416 aaPredicted RBP21.03■□□□□ 0.96
VARS-221ENST00000463184 CCDC127Q96BQ5 260 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 OTUB2Q96DC9 234 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 SPACA7Q96KW9 195 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 B3GNT5Q9BYG0 378 aa21.03■□□□□ 0.96
VARS-221ENST00000463184 TMEM30AQ9NV96 361 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms