RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ATP2A3Q93084 1043 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 FAXDC2Q96IV6 333 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 GSDMAQ96QA5 445 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 MED10Q9BTT4 135 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF518BQ9C0D4 1074 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 DNAI2Q9GZS0 605 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 EPC1Q9H2F5 836 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 GOLPH3LQ9H4A5 285 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 DPEP3Q9H4B8 488 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 ECT2Q9H8V3 914 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 CYP3A43Q9HB55 503 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 RBM12Q9NTZ6 932 aaKnown RBP7.74□□□□□ -1.17
PTPRF-210ENST00000463041 RMND1Q9NWS8 449 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 IL37Q9NZH6 218 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 MAPK8IP1Q9UQF2 711 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 DCHS1Q96JQ0 3298 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 HELZP42694 1942 aaKnown RBP7.74□□□□□ -1.17
PTPRF-210ENST00000463041 GON4LQ3T8J9 2241 aa7.74□□□□□ -1.17
PTPRF-210ENST00000463041 CCDC163A0A0D9SF12 145 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CHURC1-FNTBB4DL54 471 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 K7ESF4 209 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 LEFTY2O00292 366 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 SLC9A3R1O14745 358 aaPredicted RBP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 TNFRSF10BO14763 440 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CETN3O15182 167 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 STX10O60499 249 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CLSTN1O94985 981 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 SMC2O95347 1197 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 NFATC1O95644 943 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ABL1P00519 1130 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 HLA-DRAP01903 254 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ARSAP15289 507 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 GJA4P35212 333 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 NDST1P52848 882 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CACNA2D1P54289 1103 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 FOXK2Q01167 660 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 USP4Q13107 963 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 EML3Q32P44 896 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 COBLL1Q53SF7 1204 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 WDR44Q5JSH3 913 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ACOT1Q86TX2 421 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 LONP2Q86WA8 852 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 DDX42Q86XP3 938 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ELOA2Q8IYF1 753 aaPredicted RBP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ADGRG2Q8IZP9 1017 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 FUKQ8N0W3 1084 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 TTC39CQ8N584 583 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CCDC150Q8NCX0 1101 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ENGASEQ8NFI3 743 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 RIN3Q8TB24 985 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 SMARCD1Q96GM5 515 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 TIGD1Q96MW7 591 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 KCNK16Q96T55 309 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 P2RY13Q9BPV8 354 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 HINFPQ9BQA5 517 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 IMPG2Q9BZV3 1241 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 RNF38Q9H0F5 515 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 SDCBP2Q9H190 292 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 LINC00597Q9H2U6 94 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 FBXO44Q9H4M3 255 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 SMYD3Q9H7B4 428 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 GDPD2Q9HCC8 539 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 FBRSL1Q9HCM7 1045 aaKnown RBP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 TMEM8AQ9HCN3 771 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CSNK1G1Q9HCP0 422 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 TMEM30AQ9NV96 361 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 CHORDC1Q9UHD1 332 aaPredicted RBP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 HOOK1Q9UJC3 728 aaKnown RBP7.73□□□□□ -1.17
PTPRF-210ENST00000463041 RAB23Q9ULC3 237 aa7.73□□□□□ -1.17
PTPRF-210ENST00000463041 ABCA7Q8IZY2 2146 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 E2F8A0AVK6 867 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 FAM92AA1XBS5 289 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 HRO43593 1189 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 AP1G2O75843 785 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 OLFM2O95897 454 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 OAS1P00973 400 aaKnown RBP7.72□□□□□ -1.17
PTPRF-210ENST00000463041 ZDHHC11BP0C7U3 371 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 SDHBP21912 280 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 PIK3CAP42336 1068 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 PRCPP42785 496 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 RAP1GAPP47736 663 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 ID4P47928 161 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 GCLMP48507 274 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 FNTBP49356 437 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 ZXDBP98169 803 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 FKBP3Q00688 224 aaKnown RBP7.72□□□□□ -1.17
PTPRF-210ENST00000463041 PPP3CAQ08209 521 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 INCA1Q0VD86 236 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 ZCWPW2Q504Y3 356 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 HECTD3Q5T447 861 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 ZNF658Q5TYW1 1059 aaPredicted RBP7.72□□□□□ -1.17
PTPRF-210ENST00000463041 KRT39Q6A163 491 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 FSTL4Q6MZW2 842 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 SCARA5Q6ZMJ2 495 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 Q6ZS52 159 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 FAM35AQ86V20 835 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 WDR5BQ86VZ2 330 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 KIAA2013Q8IYS2 634 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 DCLK2Q8N568 766 aa7.72□□□□□ -1.17
PTPRF-210ENST00000463041 CAMKK1Q8N5S9 505 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms