RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 IL1RL2Q9HB29 575 aa16.37■□□□□ 0.21
SMC4-204ENST00000462787 PROCP04070 461 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 VCAM1P19320 739 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 FLT3P36888 993 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 CALML6Q8TD86 181 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 VCPIP1Q96JH7 1222 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 PPP1R2P1Q96PQ5 205 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 TEKT2Q9UIF3 430 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 AK5Q9Y6K8 562 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 MYOM1P52179 1685 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 HUS1O60921 280 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 NDUFB10O96000 172 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 DMC1Q14565 340 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 PDK2Q15119 407 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 RBM44Q6ZP01 1051 aaKnown RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 POU5F2Q8N7G0 328 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 FNDC3AQ9Y2H6 1198 aaKnown RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 A8MUI8 341 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 MTSS1O43312 755 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 LSM8O95777 96 aaKnown RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 TPI1P60174 286 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 COL9A3Q14050 684 aaPredicted RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 ANGPTL8Q6UXH0 198 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 TRPC4APQ8TEL6 797 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 EPAS1Q99814 870 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 DDX50Q9BQ39 737 aaKnown RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 MXRA8Q9BRK3 442 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 NDEL1Q9GZM8 345 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 SETD1BQ9UPS6 1966 aaKnown RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 ZMYM2Q9UBW7 1377 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 FAXCQ5TGI0 409 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 CIAPIN1Q6FI81 312 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 TAF2Q6P1X5 1199 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 PIGWQ7Z7B1 504 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 CBWD2Q8IUF1 395 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 RNF217Q8TC41 542 aa16.36■□□□□ 0.21
SMC4-204ENST00000462787 CAB39Q9Y376 341 aaPredicted RBP16.36■□□□□ 0.21
SMC4-204ENST00000462787 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.212e-16■■■■■ 67.6
SMC4-204ENST00000462787 PGM3O95394 542 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 FDX1P10109 184 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 TSHRP16473 764 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 FASP25445 335 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 NME3Q13232 169 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 BMPR2Q13873 1038 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 CYP4A22Q5TCH4 519 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 TMC5Q6UXY8 1006 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 KYAT3Q6YP21 454 aaKnown RBP16.35■□□□□ 0.21
SMC4-204ENST00000462787 ZCCHC7Q8N3Z6 543 aaKnown RBP16.35■□□□□ 0.21
SMC4-204ENST00000462787 GLMNQ92990 594 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 MYL4P12829 197 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 LIN52Q52LA3 116 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 P3H2Q8IVL5 708 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 CBWD1Q9BRT8 395 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 C1orf50Q9BV19 199 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 RIOX1Q9H6W3 641 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 TIMMDC1Q9NPL8 285 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 GALNT8Q9NY28 637 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 DMTF1Q9Y222 760 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 RPS6KL1Q9Y6S9 549 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 CCDC153Q494R4 210 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 VTI1BQ9UEU0 232 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
SMC4-204ENST00000462787 SLC12A4Q9UP95 1085 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 PTGER2P43116 358 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 KCNA1Q09470 495 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 FAM83EQ2M2I3 478 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 N4BP2L1Q5TBK1 243 aaPredicted RBP16.35■□□□□ 0.21
SMC4-204ENST00000462787 GPAMQ9HCL2 828 aa16.35■□□□□ 0.21
SMC4-204ENST00000462787 ASNA1O43681 348 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RTN3O95197 1032 aaPredicted RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 PRKAA2P54646 552 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 FITM2Q8N6M3 262 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 TFB1MQ8WVM0 346 aaKnown RBP16.34■□□□□ 0.21
SMC4-204ENST00000462787 FAM162AQ96A26 154 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RBBP8Q99708 897 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 RIC8BQ9NVN3 520 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 JCADQ9P266 1359 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 ZNF263O14978 683 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 GSNP06396 782 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 UQCRBP14927 111 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 ADORA2BP29275 332 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 FLAD1Q8NFF5 587 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 SNX19Q92543 992 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 TRIM63Q969Q1 353 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 NUDT12Q9BQG2 462 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 CNPY3Q9BT09 278 aa16.34■□□□□ 0.21
SMC4-204ENST00000462787 C6orf203Q9P0P8 240 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms