RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 KIF11P52732 1056 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 MYL5Q02045 173 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 KCNMA1Q12791 1236 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 STILQ15468 1287 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 SGO2Q562F6 1265 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 TMEM270Q6UE05 265 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 LCLAT1Q6UWP7 414 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 MAB21L3Q8N8X9 362 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 STKLD1Q8NE28 680 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 LRRC3BQ96PB8 259 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 SLITRK1Q96PX8 696 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 FUCA2Q9BTY2 467 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 TRMT61BQ9BVS5 477 aaKnown RBP12.78□□□□□ -0.36
HPS1-206ENST00000462743 NAT10Q9H0A0 1025 aaKnown RBP12.78□□□□□ -0.36
HPS1-206ENST00000462743 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 SLITRK6Q9H5Y7 841 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 KIF9Q9HAQ2 790 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 TDP1Q9NUW8 608 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
HPS1-206ENST00000462743 USP3Q9Y6I4 520 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
HPS1-206ENST00000462743 MUC3AQ02505 3323 aa12.77□□□□□ -0.36
HPS1-206ENST00000462743 O00370 1275 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 CHADO15335 359 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 OLFM2O95897 454 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 GLULP15104 373 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 HDCP19113 662 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 AVPR1AP37288 418 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 SLC5A3P53794 718 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 MFAP3P55082 362 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 STARD6P59095 220 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 MEA1Q16626 185 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 FBXL6Q8N531 539 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 SCAMP5Q8TAC9 235 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 IRF7Q92985 503 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 USP13Q92995 863 aaPredicted RBP12.77□□□□□ -0.37
HPS1-206ENST00000462743 PBXIP1Q96AQ6 731 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 CHORDC1Q9UHD1 332 aaPredicted RBP12.77□□□□□ -0.37
HPS1-206ENST00000462743 SCML2Q9UQR0 700 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 CACNA1HO95180 2353 aa12.77□□□□□ -0.37
HPS1-206ENST00000462743 TRAV19A0A0A6YYK7 116 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 KRBA1A5PL33 1030 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 ARNTLO00327 626 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 DPYSL4O14531 572 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 PRAMEF12O95522 483 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 OAS1P00973 400 aaKnown RBP12.76□□□□□ -0.37
HPS1-206ENST00000462743 TUBP50607 506 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 CLCN5P51795 746 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SLC7A9P82251 487 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 PRKCQQ04759 706 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 KRT31Q15323 416 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SLC44A4Q53GD3 710 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 HFE2Q6ZVN8 426 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SCML4Q8N228 414 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
HPS1-206ENST00000462743 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
HPS1-206ENST00000462743 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SHC3Q92529 594 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 FBXO32Q969P5 355 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 SHDQ96IW2 340 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 CYP2S1Q96SQ9 504 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 DDX23Q9BUQ8 820 aaKnown RBP12.76□□□□□ -0.37
HPS1-206ENST00000462743 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 BRD9Q9H8M2 597 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 PLCB1Q9NQ66 1216 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 TSPAN16Q9UKR8 245 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
HPS1-206ENST00000462743 FAM86C2PA6NEL3 165 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 ZNF263O14978 683 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
HPS1-206ENST00000462743 CAVIN2O95810 425 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 CFHP08603 1231 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 SETSIPP0DME0 302 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 CD19P15391 556 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 GDI1P31150 447 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 RPL34P49207 117 aaKnown RBP12.75□□□□□ -0.37
HPS1-206ENST00000462743 PSEN1P49768 467 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 BCAT1P54687 386 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 SLC8A3P57103 927 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
HPS1-206ENST00000462743 ANO6Q4KMQ2 910 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
HPS1-206ENST00000462743 HECTD3Q5T447 861 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms