RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DDR2Q16832 855 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 KNOP1Q1ED39 458 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 GAB4Q2WGN9 574 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 EML3Q32P44 896 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 IL31Q6EBC2 164 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SYT13Q7L8C5 426 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 NT5DC4Q86YG4 428 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DCP1BQ8IZD4 617 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 C12orf50Q8NA57 414 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 RPLP0P6Q8NHW5 317 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SPATA20Q8TB22 786 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 TMEM174Q8WUU8 243 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 MRPS31Q92665 395 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ACBD6Q9BR61 282 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 MTMR12Q9C0I1 747 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ECT2Q9H8V3 914 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 PDE11AQ9HCR9 933 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ABCB6Q9NP58 842 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DMAC2Q9NW81 257 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 DDX43Q9NXZ2 648 aaKnown RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 CHMP5Q9NZZ3 219 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 GCNT4Q9P109 453 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SIX4Q9UIU6 781 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 ANGPTL2Q9UKU9 493 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 MAGED2Q9UNF1 606 aaPredicted RBP8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 SLC8A2Q9UPR5 921 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 WNT6Q9Y6F9 365 aa8.48□□□□□ -1.05
CDC42BPA-210ENST00000462553 BPTFQ12830 3046 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 IGSF10Q6WRI0 2623 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 C2orf78A6NCI8 922 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZNF233A6NK53 670 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 GABRDO14764 452 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ATG13O75143 517 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 KCNK5O95279 499 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 TCF3P15923 654 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 PNPLA4P41247 253 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZXDBP98169 803 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 TSPY1Q01534 308 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 DMC1Q14565 340 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 PSMD6Q15008 389 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 TAF12Q16514 161 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 SNRNP35Q16560 246 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 NFE2Q16621 373 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CFAP221Q4G0U5 840 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ZCWPW2Q504Y3 356 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 LIMS2Q7Z4I7 341 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 SLC9A9Q8IVB4 645 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CPA6Q8N4T0 437 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CAMKK1Q8N5S9 505 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 LRRC52Q8N7C0 313 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 XXYLT1Q8NBI6 393 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 OSCP1Q8WVF1 389 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 KBTBD7Q8WVZ9 684 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 ERCC4Q92889 916 aaPredicted RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CYP2S1Q96SQ9 504 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CGRRF1Q99675 332 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 P2RY13Q9BPV8 354 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 LSM14BQ9BX40 385 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 VPS45Q9NRW7 570 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 INTS13Q9NVM9 706 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 CGNQ9P2M7 1197 aaKnown RBP8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 EBF1Q9UH73 591 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 AGAP1Q9UPQ3 857 aa8.47□□□□□ -1.05
CDC42BPA-210ENST00000462553 LNP1A1A4G5 178 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 PDXKO00764 312 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 APBB3O95704 486 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 HNRNPLP14866 589 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 OPRD1P41143 372 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 CASP4P49662 377 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 TFAMQ00059 246 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 NFIL3Q16649 462 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 FBXO43Q4G163 708 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 PMS2CLQ68D20 193 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 CC2D1AQ6P1N0 951 aaPredicted RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 FAM171BQ6P995 826 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 HS2ST1Q7LGA3 356 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 RASSF3Q86WH2 238 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 WDR49Q8IV35 697 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 SMYD4Q8IYR2 804 aaPredicted RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ADGRF2Q8IZF7 708 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 TMEM86AQ8N2M4 240 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 GUF1Q8N442 669 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 TOP6BLQ8N6T0 577 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 SPATA18Q8TC71 538 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 NOC3LQ8WTT2 800 aaKnown RBP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ZNF516Q92618 1163 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 CD101Q93033 1021 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ATP2A3Q93084 1043 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 ACDQ96AP0 544 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 FUBP3Q96I24 572 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 TIGD1Q96MW7 591 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 EDEM2Q9BV94 578 aa8.46□□□□□ -1.06
CDC42BPA-210ENST00000462553 KIAA1586Q9HCI6 787 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms