RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SMG5Q9UPR3 1016 aaKnown RBP20.13■□□□□ 0.81
VARS-220ENST00000461874 GREB1Q4ZG55 1949 aa20.13■□□□□ 0.81
VARS-220ENST00000461874 RTN3O95197 1032 aaPredicted RBP20.12■□□□□ 0.81
VARS-220ENST00000461874 OLFM2O95897 454 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 OAS1P00973 400 aaKnown RBP20.12■□□□□ 0.81
VARS-220ENST00000461874 TRIM49P0CI25 452 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 TRIM49CP0CI26 452 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 KRT13P13646 458 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 YWHAQP27348 245 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 PSMC2P35998 433 aaKnown RBP20.12■□□□□ 0.81
VARS-220ENST00000461874 PIK3CAP42336 1068 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 ASPAP45381 313 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 GCLMP48507 274 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 GALK1P51570 392 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 NDST1P52848 882 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 MCCD1P59942 119 aaPredicted RBP20.12■□□□□ 0.81
VARS-220ENST00000461874 NUCB2P80303 420 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 SLC7A9P82251 487 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 PPP3CAQ08209 521 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 DMWDQ09019 674 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 UNC93AQ86WB7 457 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 KIAA2013Q8IYS2 634 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 FUKQ8N0W3 1084 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 CRYBG2Q8N1P7 616 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 SMARCD1Q96GM5 515 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 LINC00597Q9H2U6 94 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 FBRSL1Q9HCM7 1045 aaKnown RBP20.12■□□□□ 0.81
VARS-220ENST00000461874 ANAPC1Q9H1A4 1944 aa20.12■□□□□ 0.81
VARS-220ENST00000461874 LEFTY2O00292 366 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 TNFRSF10BO14763 440 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 ABL1P00519 1130 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 HOXA6P31267 233 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 IFRD2Q12894 506 aaPredicted RBP20.11■□□□□ 0.81
VARS-220ENST00000461874 PNOCQ13519 176 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 EDRF1Q3B7T1 1238 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 NAIF1Q69YI7 327 aaPredicted RBP20.11■□□□□ 0.81
VARS-220ENST00000461874 SMYD4Q8IYR2 804 aaPredicted RBP20.11■□□□□ 0.81
VARS-220ENST00000461874 KIAA1958Q8N8K9 716 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 TAS1R2Q8TE23 839 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 OVCA2Q8WZ82 227 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 P2RY13Q9BPV8 354 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 DMAP1Q9NPF5 467 aaPredicted RBP20.11■□□□□ 0.81
VARS-220ENST00000461874 IL37Q9NZH6 218 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 NCDNQ9UBB6 729 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 HMGXB4Q9UGU5 601 aa20.11■□□□□ 0.81
VARS-220ENST00000461874 GOLGA6L4A6NEF3 574 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 CHURC1-FNTBB4DL54 471 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 AP1G2O75843 785 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 EGFP01133 1207 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 DRD1P21728 446 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 FNTBP49356 437 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 NR1H3Q13133 447 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 ORC1Q13415 861 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 PKN3Q6P5Z2 889 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 PDZD8Q8NEN9 1154 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 SCAMP5Q8TAC9 235 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 FBXO32Q969P5 355 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 EXOC4Q96A65 974 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 IMPG2Q9BZV3 1241 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 APOBEC3GQ9HC16 384 aaKnown RBP20.1■□□□□ 0.81
VARS-220ENST00000461874 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.1■□□□□ 0.817e-6■■■■■ 74.5
VARS-220ENST00000461874 KRT82Q9NSB4 513 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 CPQQ9Y646 472 aa20.1■□□□□ 0.81
VARS-220ENST00000461874 CCDC130P13994 396 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 GTF2H1P32780 548 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 SLC5A3P53794 718 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 INCA1Q0VD86 236 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 LONP2Q86WA8 852 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 C12orf29Q8N999 325 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 ZMIZ2Q8NF64 920 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 ENGASEQ8NFI3 743 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 SLC2A14Q8TDB8 520 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 SECISBP2LQ93073 1101 aaKnown RBP20.09■□□□□ 0.81
VARS-220ENST00000461874 SMOQ99835 787 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 CYP3A43Q9HB55 503 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 TMEM8AQ9HCN3 771 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 RMND1Q9NWS8 449 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 SMPD4Q9NXE4 827 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 CHORDC1Q9UHD1 332 aaPredicted RBP20.09■□□□□ 0.81
VARS-220ENST00000461874 CEP250Q9BV73 2442 aa20.09■□□□□ 0.81
VARS-220ENST00000461874 FAM92AA1XBS5 289 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 HRO43593 1189 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 ATG13O75143 517 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 BEST1O76090 585 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 NFATC1O95644 943 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 HOXC13P31276 330 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 CNR2P34972 360 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 ID4P47928 161 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 FBXO43Q4G163 708 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 SNX30Q5VWJ9 437 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 HEATR6Q6AI08 1181 aaKnown RBP20.08■□□□□ 0.81
VARS-220ENST00000461874 CD101Q93033 1021 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 EEF2KMTQ96G04 330 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 GSDMAQ96QA5 445 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 TWNKQ96RR1 684 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 NIF3L1Q9GZT8 377 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 MMRN2Q9H8L6 949 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 CSNK1G1Q9HCP0 422 aa20.08■□□□□ 0.81
VARS-220ENST00000461874 FAM49BQ9NUQ9 324 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms