RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CLCN4P51793 760 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 DSG1Q02413 1049 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 PPP1R26Q5T8A7 1209 aaPredicted RBP16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 FAM171A1Q5VUB5 890 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 TAS1R1Q7RTX1 841 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 ZNF592Q92610 1267 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 MRPL47Q9HD33 250 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 CNOT8Q9UFF9 292 aaKnown RBP16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 DNAI1Q9UI46 699 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 DUSP10Q9Y6W6 482 aa16.03■□□□□ 0.16
TMEM39A-203ENST00000461654 NCANO14594 1321 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 FAM170AA1A519 330 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 F8W810 466 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 H7C4K7 107 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 BUB1O43683 1085 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 MOCS3O95396 460 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 EPCAMP16422 314 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 MMP8P22894 467 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 KLRC2P26717 231 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 BCAT1P54687 386 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 FUT10Q6P4F1 479 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 SYT10Q6XYQ8 523 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 MMS22LQ6ZRQ5 1243 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 CEP57Q86XR8 500 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 DNAAF5Q86Y56 855 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 SYCE1Q8N0S2 351 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 ANKRD52Q8NB46 1076 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 UBA3Q8TBC4 463 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 SLC35G2Q8TBE7 412 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 SLC2A14Q8TDB8 520 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 EDAQ92838 391 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 HNRNPABQ99729 332 aaKnown RBP16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 C11orf70Q9BRQ4 267 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 AVENQ9NQS1 362 aaPredicted RBP16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 SCINQ9Y6U3 715 aa16.02■□□□□ 0.16
TMEM39A-203ENST00000461654 HCRTO43612 131 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 ATP2C2O75185 946 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 OAZ2O95190 189 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 PAPLNO95428 1278 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 ABL1P00519 1130 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 CYP1A2P05177 515 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 CCDC130P13994 396 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 MTHFRP42898 656 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 GPD2P43304 727 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 GLUD2P49448 558 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 BST2Q10589 180 aaKnown RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 TCEAL1Q15170 157 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 INTS6LQ5JSJ4 861 aaKnown RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 ZNF280DQ6N043 979 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 MON1BQ7L1V2 547 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 DCP1BQ8IZD4 617 aaKnown RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 SLC35F6Q8N357 371 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 WDTC1Q8N5D0 677 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 MYCBPAPQ8TBZ2 947 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 C18orf8Q96DM3 657 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 RPGRIP1Q96KN7 1286 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 RIPOR3Q96MK2 946 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 APOL5Q9BWW9 433 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 IRX2Q9BZI1 471 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 GPR62Q9BZJ7 368 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 RRAGDQ9NQL2 400 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 ST7Q9NRC1 585 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 PARVAQ9NVD7 372 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 WDR35Q9P2L0 1181 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 MUTYHQ9UIF7 546 aa16.01■□□□□ 0.15
TMEM39A-203ENST00000461654 CTAGE9A4FU28 777 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 OR6C75A6NL08 312 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 ADH1AP07327 375 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 FAM200BP0CF97 657 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 FGFR3P22607 806 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 PDCLQ13371 301 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 USP41Q3LFD5 358 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 CTXN3Q4LDR2 81 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 VARS2Q5ST30 1063 aaKnown RBP16■□□□□ 0.15
TMEM39A-203ENST00000461654 KIAA1841Q6NSI8 718 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 GPR149Q86SP6 731 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 CMASQ8NFW8 434 aaPredicted RBP16■□□□□ 0.15
TMEM39A-203ENST00000461654 STK32AQ8WU08 396 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 HDAC7Q8WUI4 952 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 ARHGEF26Q96DR7 871 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 NUP85Q9BW27 656 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 RHOBTB2Q9BYZ6 727 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 CRTAC1Q9NQ79 661 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 FNIP2Q9P278 1114 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 DPP7Q9UHL4 492 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 NR2E1Q9Y466 385 aa16■□□□□ 0.15
TMEM39A-203ENST00000461654 MYBPHLA2RUH7 354 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms