RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SMG9Q9H0W8 520 aaKnown RBP11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 NDST4Q9H3R1 872 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 OBP2AQ9NY56 170 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 KIAA1257Q9ULG3 409 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 PATJQ8NI35 1801 aa11.2□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZNF840PA6NDX5 716 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 TNFRSF10BO14763 440 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 PRAMEF12O95522 483 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 PAEPP09466 180 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 KRT5P13647 590 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 PFKLP17858 780 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 HDCP19113 662 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 SLC9A1P19634 815 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 MYL5Q02045 173 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARHGAP44Q17R89 818 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 GOLGA7BQ2TAP0 167 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 KLHL40Q2TBA0 621 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 SLC44A4Q53GD3 710 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 PHLDB3Q6NSJ2 640 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 TRIM65Q6PJ69 517 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 FBXL6Q8N531 539 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARL14EPQ8N8R7 260 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 RBBP8NLQ8NC74 664 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 ANKRD20A12PQ8NF67 263 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 FLCNQ8NFG4 579 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 SCAMP5Q8TAC9 235 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 BPIFB1Q8TDL5 484 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 RSPRY1Q96DX4 576 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 SHDQ96IW2 340 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 KREMEN1Q96MU8 473 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 PNPLA8Q9NP80 782 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARHGEF3Q9NR81 526 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 TDP1Q9NUW8 608 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 THG1LQ9NWX6 298 aaKnown RBP11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
TRAPPC12-213ENST00000461577 NCANO14594 1321 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 HELZP42694 1942 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 TICRRQ7Z2Z1 1910 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 KRBA1A5PL33 1030 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 C2orf78A6NCI8 922 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CHADO15335 359 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 PDGFBP01127 241 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 ACO1P21399 889 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 PON1P27169 355 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 BCAT1P54687 386 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 ZNF268Q14587 947 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 STILQ15468 1287 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 MLF2Q15773 248 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 ANO6Q4KMQ2 910 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 MIIPQ5JXC2 388 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 TTC16Q8NEE8 873 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CSGALNACT1Q8TDX6 532 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CYP2S1Q96SQ9 504 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 VPS16Q9H269 839 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 TLR8Q9NR97 1041 aaKnown RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 FANCLQ9NW38 375 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 IL37Q9NZH6 218 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 GMIPQ9P107 970 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 APEX2Q9UBZ4 518 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 CHORDC1Q9UHD1 332 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 TSPAN16Q9UKR8 245 aa11.18□□□□□ -0.62
TRAPPC12-213ENST00000461577 SMTNL1A8MU46 457 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 HHLA1C9JL84 531 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 MBL2P11226 248 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 USP8P40818 1118 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 KIF11P52732 1056 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 PLCB2Q00722 1185 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 PRKCQQ04759 706 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 FCHO2Q0JRZ9 810 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 BST2Q10589 180 aaKnown RBP11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 KRT31Q15323 416 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 HECTD3Q5T447 861 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 GJB7Q6PEY0 223 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 GPRIN1Q7Z2K8 1008 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 AOPEPQ8N6M6 819 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 UBA3Q8TBC4 463 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 SLC22A12Q96S37 553 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 UBXN6Q9BZV1 441 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 NACA2Q9H009 215 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 TBC1D17Q9HA65 648 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 SCML2Q9UQR0 700 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 CCL26Q9Y258 94 aa11.17□□□□□ -0.62
TRAPPC12-213ENST00000461577 FAM92AA1XBS5 289 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 M0QYV0 167 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 O00370 1275 aa11.16□□□□□ -0.62
TRAPPC12-213ENST00000461577 XPO1O14980 1071 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms