RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ITPRIPL2Q3MIP1 535 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 DENND4CQ5VZ89 1909 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 FOXR2Q6PJQ5 311 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 MAML2Q8IZL2 1156 aaPredicted RBP16.32■□□□□ 0.2
VARS-219ENST00000461328 ZNF687Q8N1G0 1237 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 ARL14EPQ8N8R7 260 aaPredicted RBP16.32■□□□□ 0.2
VARS-219ENST00000461328 SLC2A14Q8TDB8 520 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 SLC35C1Q96A29 364 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 CHRDQ9H2X0 955 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 TRPM5Q9NZQ8 1165 aa16.32■□□□□ 0.2
VARS-219ENST00000461328 PTPRDP23468 1912 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 PATJQ8NI35 1801 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 C2orf78A6NCI8 922 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 ABL1P00519 1130 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 FAM200BP0CF97 657 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 CHRNB1P11230 501 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 HDCP19113 662 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 FMO5P49326 533 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 CETN1Q12798 172 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 RUNX3Q13761 415 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 MTF1Q14872 753 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 ZNF394Q53GI3 561 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 TRIM68Q6AZZ1 485 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 TXNDC11Q6PKC3 985 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 CREBRFQ8IUR6 639 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 FBXO32Q969P5 355 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 TWNKQ96RR1 684 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 CYP2S1Q96SQ9 504 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 TTLL2Q9BWV7 592 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
VARS-219ENST00000461328 SEMA4AQ9H3S1 761 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 EBF3Q9H4W6 596 aa16.31■□□□□ 0.2
VARS-219ENST00000461328 ZFHX2Q9C0A1 2572 aaPredicted RBP16.3■□□□□ 0.2
VARS-219ENST00000461328 CILPO75339 1184 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
VARS-219ENST00000461328 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 PPP3CCP48454 512 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 MCCD1P59942 119 aaPredicted RBP16.3■□□□□ 0.2
VARS-219ENST00000461328 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
VARS-219ENST00000461328 PDGFRLQ15198 375 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 TPD52L1Q16890 204 aaPredicted RBP16.3■□□□□ 0.2
VARS-219ENST00000461328 ZNF528Q3MIS6 628 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 NUP93Q8N1F7 819 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 CRYBG2Q8N1P7 616 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 RIN3Q8TB24 985 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 KCNK16Q96T55 309 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 ARID3AQ99856 593 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 HPS4Q9NQG7 708 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 GCNT4Q9P109 453 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
VARS-219ENST00000461328 ZNF638Q14966 1978 aaKnown RBP16.29■□□□□ 0.2
VARS-219ENST00000461328 GREB1Q4ZG55 1949 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 F5P12259 2224 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 ARSAP15289 507 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 PFKLP17858 780 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 YWHAQP27348 245 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 IFNAR2P48551 515 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 SLC5A3P53794 718 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 LRMPQ12912 555 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 TAF10Q12962 218 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 USP4Q13107 963 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 PPP2R5DQ14738 602 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 PON2Q15165 354 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 ZNF77Q15935 545 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 PAQR9Q6ZVX9 377 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 MLKLQ8NB16 471 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 SH3RF2Q8TEC5 729 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 TATDN2Q93075 761 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 PRMT8Q9NR22 394 aaPredicted RBP16.29■□□□□ 0.2
VARS-219ENST00000461328 RBM12Q9NTZ6 932 aaKnown RBP16.29■□□□□ 0.2
VARS-219ENST00000461328 DUS2Q9NX74 493 aaKnown RBP16.29■□□□□ 0.2
VARS-219ENST00000461328 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 COQ4Q9Y3A0 265 aa16.29■□□□□ 0.2
VARS-219ENST00000461328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.29■□□□□ 0.2
VARS-219ENST00000461328 KIF26AQ9ULI4 1882 aaPredicted RBP16.29■□□□□ 0.2
VARS-219ENST00000461328 LMNAP02545 664 aaKnown RBP16.28■□□□□ 0.2
VARS-219ENST00000461328 TBXAS1P24557 533 aaPredicted RBP16.28■□□□□ 0.2
VARS-219ENST00000461328 CCR3P51677 355 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 AMPD2Q01433 879 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 CUL2Q13617 745 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 DGKKQ5KSL6 1271 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 CPA6Q8N4T0 437 aa16.28■□□□□ 0.2
VARS-219ENST00000461328 PDZD8Q8NEN9 1154 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms