RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 COQ4Q9Y3A0 265 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 ACACBO00763 2458 aa10.08□□□□□ -0.8
COL6A2-207ENST00000460886 TPRP12270 2363 aaKnown RBP10.07□□□□□ -0.8
COL6A2-207ENST00000460886 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 KCNJ18B7U540 433 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 ATP2C2O75185 946 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 RETP07949 1114 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 FAM163BP0C2L3 166 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 GABRR2P28476 465 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 CDC25CP30307 473 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 ASPAP45381 313 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 PSMC1P62191 440 aaKnown RBP10.07□□□□□ -0.8
COL6A2-207ENST00000460886 CETN1Q12798 172 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 KCNJ12Q14500 433 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 ZSCAN23Q3MJ62 389 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 ARHGAP15Q53QZ3 475 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 INTS6LQ5JSJ4 861 aaKnown RBP10.07□□□□□ -0.8
COL6A2-207ENST00000460886 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 DCP1BQ8IZD4 617 aaKnown RBP10.07□□□□□ -0.8
COL6A2-207ENST00000460886 TATDN2Q93075 761 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 RTKNQ9BST9 563 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 NIF3L1Q9GZT8 377 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 NAT10Q9H0A0 1025 aaKnown RBP10.07□□□□□ -0.8
COL6A2-207ENST00000460886 ATXN3LQ9H3M9 355 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 TMLHEQ9NVH6 421 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 FANCLQ9NW38 375 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 GMEB2Q9UKD1 530 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 GTF3C4Q9UKN8 822 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 NME7Q9Y5B8 376 aa10.07□□□□□ -0.8
COL6A2-207ENST00000460886 RALGAPA1Q6GYQ0 2036 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CCDC163A0A0D9SF12 145 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 A8MXQ7 604 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 PMM2O15305 246 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 P4HA2O15460 535 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 HRO43593 1189 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 SOAT2O75908 522 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 PRKCSHP14314 528 aaPredicted RBP10.06□□□□□ -0.8
COL6A2-207ENST00000460886 HMGA1P17096 107 aaKnown RBP10.06□□□□□ -0.8
COL6A2-207ENST00000460886 SOX9P48436 509 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 MYL5Q02045 173 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 LRMPQ12912 555 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 VEPH1Q14D04 833 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 MAN2A1Q16706 1144 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CCDC142Q17RM4 750 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 TCP11X2Q5H9J9 407 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 GPR158Q5T848 1215 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 Q6ZS52 159 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 TMEM150AQ86TG1 271 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 LONP2Q86WA8 852 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 AOPEPQ8N6M6 819 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CHFRQ96EP1 664 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 LPIN3Q9BQK8 851 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 FAM83CQ9BQN1 747 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 SYT15Q9BQS2 421 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 FUCA2Q9BTY2 467 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 SLC46A2Q9BY10 475 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 DPEP3Q9H4B8 488 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CYP3A43Q9HB55 503 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CRTAC1Q9NQ79 661 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
COL6A2-207ENST00000460886 ABI2Q9NYB9 513 aaPredicted RBP10.06□□□□□ -0.8
COL6A2-207ENST00000460886 GTSE1Q9NYZ3 720 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CDV3Q9UKY7 258 aaKnown RBP10.06□□□□□ -0.8
COL6A2-207ENST00000460886 CDH9Q9ULB4 789 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 SPAG17Q6Q759 2223 aa10.06□□□□□ -0.8
COL6A2-207ENST00000460886 KIAA1549LQ6ZVL6 1849 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ZNF638Q14966 1978 aaKnown RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 PES1O00541 588 aaKnown RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 DPYSL4O14531 572 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 FOXD2O60548 495 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 F11P03951 625 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 HAPLN1P10915 354 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CD58P19256 250 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 DDX6P26196 483 aaKnown RBP eCLIP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 EEF1GP26641 437 aaKnown RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ZNF165P49910 485 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 KPNA1P52294 538 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 NDST1P52848 882 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 DMWDQ09019 674 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ORC1Q13415 861 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 NCAPHQ15003 741 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CSRP2Q16527 193 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 NFE2Q16621 373 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 ITPRIPL2Q3MIP1 535 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 MGAT5BQ3V5L5 792 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 VWA3BQ502W6 1294 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 MDH1BQ5I0G3 518 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 FAM171BQ6P995 826 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 WDR5BQ86VZ2 330 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 SPATA2LQ8IUW3 424 aaPredicted RBP10.05□□□□□ -0.8
COL6A2-207ENST00000460886 CMTM8Q8IZV2 173 aa10.05□□□□□ -0.8
COL6A2-207ENST00000460886 EHBP1Q8NDI1 1231 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms