RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 OTOP3Q7RTS5 596 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 HS6ST3Q8IZP7 471 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 ZSWIM1Q9BR11 485 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 TTLL2Q9BWV7 592 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 MAGED2Q9UNF1 606 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-209ENST00000460573 SORCS3Q9UPU3 1222 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 MRPS23Q9Y3D9 190 aaKnown RBP23.74■■□□□ 1.39
C9orf3-209ENST00000460573 ZFP37Q9Y6Q3 630 aaPredicted RBP23.74■■□□□ 1.39
C9orf3-209ENST00000460573 TECTAO75443 2155 aa23.74■■□□□ 1.39
C9orf3-209ENST00000460573 MYO10Q9HD67 2058 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 TNFRSF10BO14763 440 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 THAP12O43422 761 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 MYL4P12829 197 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 PPP3CCP48454 512 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 PKDCCQ504Y2 493 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 TTC30AQ86WT1 665 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 GCNAQ96QF7 691 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 KCNH6Q9H252 994 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 FBXO44Q9H4M3 255 aa23.73■■□□□ 1.39
C9orf3-209ENST00000460573 XPO1O14980 1071 aaKnown RBP23.72■■□□□ 1.39
C9orf3-209ENST00000460573 CCDC172P0C7W6 258 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 SLC5A3P53794 718 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 UBALD2Q8IYN6 164 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 ZNF334Q9HCZ1 680 aaPredicted RBP23.72■■□□□ 1.39
C9orf3-209ENST00000460573 IL37Q9NZH6 218 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 LIMD1Q9UGP4 676 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 ZMYM5Q9UJ78 669 aa23.72■■□□□ 1.39
C9orf3-209ENST00000460573 ITIH6Q6UXX5 1313 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 SOBPA7XYQ1 873 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 HHLA1C9JL84 531 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 M0QYV0 167 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 PNMA6AP0CW24 399 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-209ENST00000460573 YWHAQP27348 245 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 GABRR2P28476 465 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 GBP2P32456 591 aaPredicted RBP23.71■■□□□ 1.39
C9orf3-209ENST00000460573 PDE6CP51160 858 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 PDE4CQ08493 712 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 SLC5A9Q2M3M2 681 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 BMP8AQ7Z5Y6 402 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 SLC47A2Q86VL8 602 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 ZDHHC14Q8IZN3 488 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 OVCA2Q8WZ82 227 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 IL21Q9HBE4 155 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 GDE1Q9NZC3 331 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 CDH7Q9ULB5 785 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 PCDHGC3Q9UN70 934 aa23.71■■□□□ 1.39
C9orf3-209ENST00000460573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.71■■□□□ 1.39
C9orf3-209ENST00000460573 DENND4AQ7Z401 1863 aa23.7■■□□□ 1.39
C9orf3-209ENST00000460573 F11P03951 625 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ASGR2P07307 311 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 CYP11B1P15538 503 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 KRT9P35527 623 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 CCR2P41597 374 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 PLA2G4AP47712 749 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 PLCB2Q00722 1185 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ARHGAP15Q53QZ3 475 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 GAREM2Q75VX8 874 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 GET4Q7L5D6 327 aaPredicted RBP23.7■■□□□ 1.38
C9orf3-209ENST00000460573 PIGZQ86VD9 579 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ZNF677Q86XU0 584 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 FBXL6Q8N531 539 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 PDZD8Q8NEN9 1154 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ITFG1Q8TB96 612 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 UBA3Q8TBC4 463 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 KCTD13Q8WZ19 329 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 TCEAL4Q96EI5 215 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 SLITRK1Q96PX8 696 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 TTYH3Q9C0H2 523 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ATXN3LQ9H3M9 355 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 ACP6Q9NPH0 428 aa23.7■■□□□ 1.38
C9orf3-209ENST00000460573 A0A1W2PQJ5 194 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 A0A1W2PRU2 124 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 FAM92AA1XBS5 289 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 GFPT2O94808 682 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 CALCAP01258 141 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 DDX6P26196 483 aaKnown RBP eCLIP23.69■■□□□ 1.38
C9orf3-209ENST00000460573 USP46P62068 366 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 RAB41Q5JT25 222 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 STKLD1Q8NE28 680 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 SHKBP1Q8TBC3 707 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 SLC35F5Q8WV83 523 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 BAP1Q92560 729 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 FGF13Q92913 245 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 HSFY1Q96LI6 401 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 TRIM5Q9C035 493 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 LHX5Q9H2C1 402 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 MFSD1Q9H3U5 465 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 TRPM5Q9NZQ8 1165 aa23.69■■□□□ 1.38
C9orf3-209ENST00000460573 NCANO14594 1321 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 NOTCH4Q99466 2003 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 MOSPD3O75425 235 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 FERP16591 822 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 GPD2P43304 727 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 KIF11P52732 1056 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 ZNF397Q8NF99 534 aaPredicted RBP23.68■■□□□ 1.38
C9orf3-209ENST00000460573 STK32AQ8WU08 396 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 MRPS31Q92665 395 aaKnown RBP23.68■■□□□ 1.38
C9orf3-209ENST00000460573 SECISBP2LQ93073 1101 aaKnown RBP23.68■■□□□ 1.38
C9orf3-209ENST00000460573 PRRX2Q99811 253 aa23.68■■□□□ 1.38
C9orf3-209ENST00000460573 NUCKS1Q9H1E3 243 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms