RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 BFSP2Q13515 415 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 DSC3Q14574 896 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 MESDQ14696 234 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 MBTPS1Q14703 1052 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 SGO2Q562F6 1265 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 CCBE1Q6UXH8 406 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 LRRC8DQ7L1W4 858 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 MRPL10Q7Z7H8 261 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 PHLDB2Q86SQ0 1253 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 PHF13Q86YI8 300 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 FAM126BQ8IXS8 530 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 ZBTB8BQ8NAP8 495 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 GSTCDQ8NEC7 633 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 APPL2Q8NEU8 664 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 OR6B3Q8NGW1 331 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 SREK1Q8WXA9 508 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 GOLGA1Q92805 767 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 VCPIP1Q96JH7 1222 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 MRPL45Q9BRJ2 306 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 OXCT2Q9BYC2 517 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 PAIP2BQ9ULR5 123 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 FAN1Q9Y2M0 1017 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 SASH3O75995 380 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 SELPP16109 830 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 LRPAP1P30533 357 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 PAFAH1B1P43034 410 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 CDK7P50613 346 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 LILRA4P59901 499 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 SOWAHAQ2M3V2 549 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 C11orf63Q6NUN7 778 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 CREG2Q8IUH2 290 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 C2orf49Q9BVC5 232 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 VCX3BQ9H321 246 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 ZNF304Q9HCX3 659 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 AVENQ9NQS1 362 aaPredicted RBP10.89□□□□□ -0.67
HERC4-207ENST00000460168 GDAP2Q9NXN4 497 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 ANAPC7Q9UJX3 599 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 INPP5FQ9Y2H2 1132 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 ALG6Q9Y672 507 aa10.89□□□□□ -0.67
HERC4-207ENST00000460168 A8MXQ7 604 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 M0QYV0 167 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 SPTLC1O15269 473 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 HUS1O60921 280 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 KIAA0754O94854 1291 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 PENKP01210 267 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 CALB1P05937 261 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 MMP8P22894 467 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 ATN1P54259 1190 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 DMPKQ09013 629 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 LLGL2Q6P1M3 1020 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 ERICH1Q86X53 443 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 BTBD6Q96KE9 485 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 MRPL47Q9HD33 250 aaKnown RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 UBN1Q9NPG3 1134 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 MIOSQ9NXC5 875 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 CACNG4Q9UBN1 327 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 KIAA1257Q9ULG3 409 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.88□□□□□ -0.67
HERC4-207ENST00000460168 SCINQ9Y6U3 715 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 DYTNA2CJ06 578 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 CASTOR2A6NHX0 329 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 LSM1O15116 133 aaKnown RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 SPOPO43791 374 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 POMCP01189 267 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 GBP2P32456 591 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 CDH5P33151 784 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 CLCNKBP51801 687 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 DYNC1I2Q13409 638 aaKnown RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 CFAP221Q4G0U5 840 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 DENND1BQ6P3S1 775 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 NCCRP1Q6ZVX7 275 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 PCGF5Q86SE9 256 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 ACOT1Q86TX2 421 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 ECHDC2Q86YB7 292 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 APLFQ8IW19 511 aaPredicted RBP10.88□□□□□ -0.67
HERC4-207ENST00000460168 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.88□□□□□ -0.67
HERC4-207ENST00000460168 C12orf29Q8N999 325 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 HES6Q96HZ4 224 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 RPGRIP1Q96KN7 1286 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 DNAI2Q9GZS0 605 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 SNX25Q9H3E2 840 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 ABCB6Q9NP58 842 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 PARVAQ9NVD7 372 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 STXBP5LQ9Y2K9 1186 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 TIMM22Q9Y584 194 aa10.88□□□□□ -0.67
HERC4-207ENST00000460168 MYO1FO00160 1098 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 O00370 1275 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 PDE2AO00408 941 aaPredicted RBP10.87□□□□□ -0.67
HERC4-207ENST00000460168 PODXLO00592 558 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 MICAL2O94851 1124 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
HERC4-207ENST00000460168 OXCT1P55809 520 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 ITIH3Q06033 890 aa10.87□□□□□ -0.67
HERC4-207ENST00000460168 STILQ15468 1287 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms