RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NQO1P15559 274 aaKnown RBP18.97■□□□□ 0.63
HPS3-202ENST00000460120 ELK3P41970 407 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 ROR1Q01973 937 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 SMAD1Q15797 465 aaKnown RBP18.97■□□□□ 0.63
HPS3-202ENST00000460120 KIZQ2M2Z5 673 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 ZNF449Q6P9G9 518 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 CEP128Q6ZU80 1094 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 C7orf31Q8N865 590 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 NETO2Q8NC67 525 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 ERP27Q96DN0 273 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 B3GNT5Q9BYG0 378 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 FAM49AQ9H0Q0 323 aaPredicted RBP18.97■□□□□ 0.63
HPS3-202ENST00000460120 MYLK2Q9H1R3 596 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 DPP3Q9NY33 737 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 SLC17A7Q9P2U7 560 aa18.97■□□□□ 0.63
HPS3-202ENST00000460120 GSTA1P08263 222 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 GBP2P32456 591 aaPredicted RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 PTPN7P35236 360 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 RIBC1Q8N443 379 aaPredicted RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 ATP11CQ8NB49 1132 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 ASNSD1Q9NWL6 643 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 PRKAG3Q9UGI9 489 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 SNX9Q9Y5X1 595 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 NR2E3Q9Y5X4 410 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 MGAMO43451 1857 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 PRPSAP2O60256 369 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 FAM155BO75949 473 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 GPD1P21695 349 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 TARSP26639 723 aaKnown RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 MSH2P43246 934 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 DPYSL3Q14195 570 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 ZNF268Q14587 947 aaPredicted RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 VSIG1Q86XK7 387 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 ANKRD13AQ8IZ07 590 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 PDIK1LQ8N165 341 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 CDCA5Q96FF9 252 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 TRIM56Q9BRZ2 755 aaKnown RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 RXFP1Q9HBX9 757 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 NPHS2Q9NP85 383 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 ADARB2Q9NS39 739 aaKnown RBP18.96■□□□□ 0.63
HPS3-202ENST00000460120 DCTN4Q9UJW0 460 aa18.96■□□□□ 0.63
HPS3-202ENST00000460120 DNAJC25-GNG10A0A024R161 153 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 APOC4-APOC2K7ER74 178 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 KCNN4O15554 427 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 MGRN1O60291 552 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 APOC2P02655 101 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 TFE3P19532 575 aaPredicted RBP18.95■□□□□ 0.62
HPS3-202ENST00000460120 ATXN1P54253 815 aaKnown RBP18.95■□□□□ 0.62
HPS3-202ENST00000460120 ARHGAP1Q07960 439 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 BNIP1Q12981 228 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 CA9Q16790 459 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 PPP1R26Q5T8A7 1209 aaPredicted RBP18.95■□□□□ 0.62
HPS3-202ENST00000460120 GPATCH11Q8N954 259 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 TTC13Q8NBP0 860 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 DENND1AQ8TEH3 1009 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 FAF2Q96CS3 445 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 MRPL45Q9BRJ2 306 aaKnown RBP18.95■□□□□ 0.62
HPS3-202ENST00000460120 RAB6BQ9NRW1 208 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 ACTL7BQ9Y614 415 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 PHBP35232 272 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 CXorf38Q8TB03 319 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 ETNK1Q9HBU6 452 aa18.95■□□□□ 0.62
HPS3-202ENST00000460120 KBTBD13C9JR72 458 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 HMGCRP04035 888 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 NEFHP12036 1026 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 GALNTL6Q49A17 601 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 PMF1Q6P1K2 205 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 PCGF5Q86SE9 256 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 CTAGE3PQ8IX95 158 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 EXOC8Q8IYI6 725 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 TCP10LQ8TDR4 215 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 MCRS1Q96EZ8 462 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 ACAP3Q96P50 834 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 WDR35Q9P2L0 1181 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 RPSAP08865 295 aaKnown RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 VDRP11473 427 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 SESTD1Q86VW0 696 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 CMASQ8NFW8 434 aaPredicted RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 CLEC4CQ8WTT0 213 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 HAO1Q9UJM8 370 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 NPTXRO95502 500 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 MCF2P10911 925 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 P4HA1P13674 534 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 OSBPP22059 807 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 ZNF143P52747 638 aaPredicted RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 YARSP54577 528 aaKnown RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 RNASELQ05823 741 aaKnown RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 NR1H3Q13133 447 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 EFHC2Q5JST6 749 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 SNTG2Q9NY99 539 aa18.94■□□□□ 0.62
HPS3-202ENST00000460120 BARX2Q9UMQ3 279 aaPredicted RBP18.94■□□□□ 0.62
HPS3-202ENST00000460120 SPDYE5A6NIY4 337 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 TYROBPO43914 113 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 PDGFRBP09619 1106 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 RBL1P28749 1068 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 KBTBD12Q3ZCT8 623 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 ACCSLQ4AC99 568 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 FNIP1Q8TF40 1166 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 FAM172AQ8WUF8 416 aa18.93■□□□□ 0.62
HPS3-202ENST00000460120 C18orf25Q96B23 403 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms