RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SDE2Q6IQ49 451 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 DCP1BQ8IZD4 617 aaKnown RBP20.33■□□□□ 0.84
SNX27-204ENST00000458013 KRT84Q9NSB2 600 aa20.33■□□□□ 0.84
SNX27-204ENST00000458013 CASTOR2A6NHX0 329 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 AP3B1O00203 1094 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 FAM83EQ2M2I3 478 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 NOTUMQ6P988 496 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 GLB1LQ6UWU2 654 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 STRA8Q7Z7C7 330 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 LUZP2Q86TE4 346 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 ENTPD7Q9NQZ7 604 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 IGSF9BQ9UPX0 1349 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 GLI2P10070 1586 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 LRRIQ3A6PVS8 624 aaPredicted RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 EFEMP1Q12805 493 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 FAM172AQ8WUF8 416 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 AGPAT3Q9NRZ7 376 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 BLOC1S6Q9UL45 172 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 SOAT2O75908 522 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 RPL10AP62906 217 aaKnown RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 RUBCNQ92622 972 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 KRT35Q92764 455 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 CELF6Q96J87 481 aaKnown RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 ZNF333Q96JL9 665 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 TIPINQ9BVW5 301 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 N6AMT1Q9Y5N5 214 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 GRB10Q13322 594 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 GPR141Q7Z602 305 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 SLC13A5Q86YT5 568 aaPredicted RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 ANKS1AQ92625 1134 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 ZBTB10Q96DT7 871 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 PADI4Q9UM07 663 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 RFX7Q2KHR2 1363 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 ZC3H11AO75152 810 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNX27-204ENST00000458013 RFC5P40937 340 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 ALDH9A1P49189 494 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 DENND1BQ6P3S1 775 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 UNC45BQ8IWX7 931 aa20.32■□□□□ 0.84
SNX27-204ENST00000458013 UTP6Q9NYH9 597 aaKnown RBP20.32■□□□□ 0.84
SNX27-204ENST00000458013 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 NAPEPLDQ6IQ20 393 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 VIPAS39Q9H9C1 493 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 TFRCP02786 760 aaKnown RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 TAF6P49848 677 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 STILQ15468 1287 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 CES3Q6UWW8 571 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 TNIP2Q8NFZ5 429 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 PPP1R13LQ8WUF5 828 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ZSWIM1Q9BR11 485 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 CARD9Q9H257 536 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 TRPC5OSA6NMA1 111 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ERI2A8K979 691 aaKnown RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 H2AFYO75367 372 aaKnown RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 ODC1P11926 461 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 HERVK_113P62684 666 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 PDPK2PQ6A1A2 396 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 TRIM65Q6PJ69 517 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 NLRP9Q7RTR0 991 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ACOX2Q99424 681 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ATP6V1HQ9UI12 483 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 EIF3DO15371 548 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNX27-204ENST00000458013 NQO1P15559 274 aaKnown RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 GCLCP48506 637 aaPredicted RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 PPP1R14AQ96A00 147 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ILKAPQ9H0C8 392 aaPredicted RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 VCPKMTQ9H867 229 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 NT5MQ9NPB1 228 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 FAM153AQ9UHL3 310 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 COPG1Q9Y678 874 aaKnown RBP20.31■□□□□ 0.84
SNX27-204ENST00000458013 ARP10275 920 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 CACHD1Q5VU97 1274 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 PHF21BQ96EK2 531 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 OSGEPL1Q9H4B0 414 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 ERAP1Q9NZ08 941 aa20.31■□□□□ 0.84
SNX27-204ENST00000458013 A0A1W2PQJ5 194 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 BAIAP3O94812 1187 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 SLC38A7Q9NVC3 462 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 C2orf81A6NN90 581 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 STRIP1Q5VSL9 837 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 CYB5D1Q6P9G0 228 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 GPRASP2Q96D09 838 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 SEPHS2Q99611 448 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 RBBP8Q99708 897 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 NDEL1Q9GZM8 345 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 ZFYVE28Q9HCC9 887 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 CYB561D2O14569 222 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 P4HA2O15460 535 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 PRUNE1Q86TP1 453 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 CBWD1Q9BRT8 395 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 DEFA1P59665 94 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 DEFA3P59666 94 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 CYLC2Q14093 348 aaPredicted RBP20.3■□□□□ 0.84
SNX27-204ENST00000458013 STARD3Q14849 445 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 AASDHQ4L235 1098 aaPredicted RBP20.3■□□□□ 0.84
SNX27-204ENST00000458013 SIX5Q8N196 739 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 ATP6V0D2Q8N8Y2 350 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 NACC2Q96BF6 587 aa20.3■□□□□ 0.84
SNX27-204ENST00000458013 CAPN6Q9Y6Q1 641 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms