RNA–Protein interactions for RNA: ENST00000457104.6

VEGFA-210, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-210ENST00000457104 ORC1Q13415 861 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 PDGFRLQ15198 375 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 EML3Q32P44 896 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 EDRF1Q3B7T1 1238 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 FSTL4Q6MZW2 842 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 FAM35AQ86V20 835 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 NUP93Q8N1F7 819 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 ZMIZ2Q8NF64 920 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 SPATA20Q8TB22 786 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 OSCP1Q8WVF1 389 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 TNIP3Q96KP6 325 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 LINC00597Q9H2U6 94 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 APOBEC3GQ9HC16 384 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■□□□ 14
VEGFA-210ENST00000457104 DUS2Q9NX74 493 aaKnown RBP13.15□□□□□ -0.3
VEGFA-210ENST00000457104 IL37Q9NZH6 218 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 EHD2Q9NZN4 543 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 WNT6Q9Y6F9 365 aa13.15□□□□□ -0.3
VEGFA-210ENST00000457104 BEST1O76090 585 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-210ENST00000457104 P4HA1P13674 534 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 CCDC130P13994 396 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 GJA4P35212 333 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 SLC7A9P82251 487 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 DMWDQ09019 674 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 INCA1Q0VD86 236 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 PKN3Q6P5Z2 889 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 UNC93AQ86WB7 457 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 SYNPOQ8N3V7 929 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 DCLK2Q8N568 766 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
VEGFA-210ENST00000457104 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 GSDMAQ96QA5 445 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 SMOQ99835 787 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 EPC1Q9H2F5 836 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 CSNK1G1Q9HCP0 422 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 SPAG17Q6Q759 2223 aa13.14□□□□□ -0.31
VEGFA-210ENST00000457104 LAMA1P25391 3075 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 FAM92AA1XBS5 289 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 LEFTY2O00292 366 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 CLSTN1O94985 981 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 RTN3O95197 1032 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 KRT13P13646 458 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 YWHAQP27348 245 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 PDE6CP51160 858 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 GALK1P51570 392 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 NRLP54845 237 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 IFRD2Q12894 506 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 PPP2R5DQ14738 602 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 ZNF658Q5TYW1 1059 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 ZC3H3Q8IXZ2 948 aaKnown RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 WHAMMQ8TF30 809 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 RUBCNQ92622 972 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 EZH1Q92800 747 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 ATP2A3Q93084 1043 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 TIGD1Q96MW7 591 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 KRT82Q9NSB4 513 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 CHORDC1Q9UHD1 332 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-210ENST00000457104 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 ATP8B3O60423 1300 aa13.13□□□□□ -0.31
VEGFA-210ENST00000457104 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 AP1G2O75843 785 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 ABL1P00519 1130 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 EGFP01133 1207 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 ZDHHC11BP0C7U3 371 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 GTF2H1P32780 548 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 IFNAR2P48551 515 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 PGFP49763 221 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 SLC5A3P53794 718 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
VEGFA-210ENST00000457104 GRSF1Q12849 480 aaKnown RBP eCLIP13.12□□□□□ -0.31
VEGFA-210ENST00000457104 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 ANKRD40Q6AI12 368 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 PDZD8Q8NEN9 1154 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 CCDC34Q96HJ3 373 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 ZFRQ96KR1 1074 aaKnown RBP13.12□□□□□ -0.31
VEGFA-210ENST00000457104 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 MMRN2Q9H8L6 949 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 CYP3A43Q9HB55 503 aa13.12□□□□□ -0.31
VEGFA-210ENST00000457104 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms