RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CBWD6Q4V339 395 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 CBWD3Q5JTY5 395 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 CBWD5Q5RIA9 395 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 CLVS1Q8IUQ0 354 aaPredicted RBP10.07□□□□□ -0.8
LINC01940-201ENST00000455228 FAM178BQ8IXR5 827 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 ARRDC4Q8NCT1 418 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 CFAP36Q96G28 342 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 NUDCD1Q96RS6 583 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 ZSWIM1Q9BR11 485 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
LINC01940-201ENST00000455228 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
LINC01940-201ENST00000455228 HNRNPCL1O60812 293 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 HLA-DOAP06340 250 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 COMTP21964 271 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RPL9P32969 192 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CHKAP35790 457 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 PTGIRP43119 386 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 GPC5P78333 572 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RELQ04864 619 aaPredicted RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 AP3B2Q13367 1082 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CTTNQ14247 550 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 BMT2Q1RMZ1 405 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 UBAP2Q5T6F2 1119 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SLFN13Q68D06 897 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 KLHDC10Q6PID8 442 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 C1orf228Q6PIY5 440 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 LRRC74BQ6ZQY2 392 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CAPN12Q6ZSI9 719 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SELENONQ9NZV5 590 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 KLHL14Q9P2G3 628 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 PCYOX1Q9UHG3 505 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 MRPL11Q9Y3B7 192 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 MYO3BQ8WXR4 1341 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CYP3A7-CYP3A51PA0A087WV96 503 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 TTLL13PA6NNM8 815 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ALX3O95076 343 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CYP3A7P24462 503 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SNAP25P60880 206 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 GNA13Q14344 377 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 KCNJ8Q15842 424 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 C4orf22Q6V702 233 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RANBP10Q6VN20 620 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CHAC2Q8WUX2 184 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RMDN1Q96DB5 314 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 EIF2AK1Q9BQI3 630 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ROPN1BQ9BZX4 212 aaPredicted RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 EHD1Q9H4M9 534 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ROPN1Q9HAT0 212 aaPredicted RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 USP40Q9NVE5 1235 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 NCKIPSDQ9NZQ3 722 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 GABBR1Q9UBS5 961 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 BCS1LQ9Y276 419 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ARL2BPQ9Y2Y0 163 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ROBO1Q9Y6N7 1651 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 TBX3O15119 743 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ENO2P09104 434 aaPredicted RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ETS2P15036 469 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 PHBP35232 272 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 COILP38432 576 aaPredicted RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 GTF2IP78347 998 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 NPTX1Q15818 432 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RNASEH2BQ5TBB1 312 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 RINT1Q6NUQ1 792 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 KBTBD2Q8IY47 623 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ETNPPLQ8TBG4 499 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SLC20A1Q8WUM9 679 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SECISBP2Q96T21 854 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 CDH19Q9H159 772 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 OLFML3Q9NRN5 406 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 SLC38A7Q9NVC3 462 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 DNAJC17Q9NVM6 304 aaKnown RBP10.06□□□□□ -0.8
LINC01940-201ENST00000455228 NKIRAS1Q9NYS0 192 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 PFASO15067 1338 aa10.06□□□□□ -0.8
LINC01940-201ENST00000455228 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 EIF4E1BA6NMX2 242 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 GPC4O75487 556 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 GGPS1O95749 300 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FUCA1P04066 466 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 CD48P09326 243 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TCF3P15923 654 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SLC1A1P43005 524 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 CENPAP49450 140 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 VPS41P49754 854 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 P2RX3P56373 397 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 PPP2R2BQ00005 443 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TAGLNQ01995 201 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 SPIRE1Q08AE8 756 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FBXO43Q4G163 708 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 ODR4Q5SWX8 454 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TRMT10CQ7L0Y3 403 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 MKNK1Q9BUB5 465 aa10.05□□□□□ -0.8
LINC01940-201ENST00000455228 DDX23Q9BUQ8 820 aaKnown RBP10.05□□□□□ -0.8
LINC01940-201ENST00000455228 TMEM109Q9BVC6 243 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms