RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 HOXD12P35452 270 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 SNRPFP62306 86 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 NOP14P78316 857 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 CYP27A1Q02318 531 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 CRY1Q16526 586 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 C2orf27AQ580R0 203 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 EOGTQ5NDL2 527 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 TDRD10Q5VZ19 366 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 ANO7Q6IWH7 933 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 LPCAT2Q7L5N7 544 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 TRMT11Q7Z4G4 463 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 LIMS2Q7Z4I7 341 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 WDR49Q8IV35 697 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 STKLD1Q8NE28 680 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 PDZD8Q8NEN9 1154 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 CXorf38Q8TB03 319 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 RIN3Q8TB24 985 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 MYCBPAPQ8TBZ2 947 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 WHAMMQ8TF30 809 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 MYLPFQ96A32 169 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 DNAJC19Q96DA6 116 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 OTUB2Q96DC9 234 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 C8orf48Q96LL4 319 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 SLC22A12Q96S37 553 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 CBWD1Q9BRT8 395 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 TTLL2Q9BWV7 592 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 ELOVL4Q9GZR5 314 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 PDE11AQ9HCR9 933 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 RXFP3Q9NSD7 469 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 TBC1D7Q9P0N9 293 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 EVLQ9UI08 416 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 SIX4Q9UIU6 781 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 FBXO2Q9UK22 296 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 FAM208BQ5VWN6 2430 aa8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 MYO18AQ92614 2054 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-209ENST00000454952 ATP8B3O60423 1300 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 LNP1A1A4G5 178 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 GOLGA8IPA6NC78 632 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 C2orf78A6NCI8 922 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 ZNF840PA6NDX5 716 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 GOLGA8JA6NMD2 632 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 K7EQS6 105 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TNFRSF10BO14763 440 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 DCLK1O15075 740 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 ZBTB24O43167 697 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TACC1O75410 805 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 PRPF6O94906 941 aaKnown RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 RTN3O95197 1032 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 OLFM2O95897 454 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 BDNFP23560 247 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 HOXC13P31276 330 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 RDXP35241 583 aaKnown RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 GNL1P36915 607 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 OPRD1P41143 372 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 GRIA2P42262 883 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TNNC1P63316 161 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 AMPD3Q01432 767 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 KCNA1Q09470 495 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 ZNF252P-AS1Q0IIN9 211 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 RESTQ13127 1097 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 BTBD8Q5XKL5 378 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TCEAL6Q6IPX3 200 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 RABEPKQ7Z6M1 372 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 OSTM1Q86WC4 334 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 OVCA2Q8WZ82 227 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 EZH1Q92800 747 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TCEAL3Q969E4 200 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 FNBP1Q96RU3 617 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 PNKPQ96T60 521 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 MMS19Q96T76 1030 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 NUSAP1Q9BXS6 441 aaKnown RBP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 TNMDQ9H2S6 317 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 LINC00597Q9H2U6 94 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 CUEDC2Q9H467 287 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 SMOC1Q9H4F8 434 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 PCIF1Q9H4Z3 704 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 SLC32A1Q9H598 525 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 BCCIPQ9P287 314 aaKnown RBP eCLIP8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 CLIC4Q9Y696 253 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 MYOFQ9NZM1 2061 aa8.55□□□□□ -1.04
NIF3L1-209ENST00000454952 UBE4BO95155 1302 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 PCNX2A6NKB5 2137 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ASCC3Q8N3C0 2202 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 E2F8A0AVK6 867 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 EIF3DO15371 548 aaKnown RBP eCLIP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ATP2C2O75185 946 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 KAT7O95251 611 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ABL1P00519 1130 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 OAS1P00973 400 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 CYP17A1P05093 508 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 PDGFRBP09619 1106 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ADH5P11766 374 aa8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 TRIM21P19474 475 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-209ENST00000454952 ATICP31939 592 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms