RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 V9GYY5 206 aaPredicted RBP7.17□□□□□ -1.26
ECHDC1-210ENST00000454859 PLXNA3P51805 1871 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ABHD14A-ACY1A0A1B0GW23 586 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 E5RJQ4 531 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ENPP3O14638 875 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PPEF2O14830 753 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RAD51CO43502 376 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PRPSAP2O60256 369 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 OPA1O60313 960 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 LRCH4O75427 683 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 B3GAT3O94766 335 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 TRUB2O95900 331 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 FGFR1P11362 822 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 TGM2P21980 687 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CDKN2BP42772 138 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 HCAR3P49019 387 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 NR2C2P49116 596 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CLCNKBP51801 687 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 EIF3BP55884 814 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 C1QTNF8P60827 252 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF252P-AS1Q0IIN9 211 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PTK6Q13882 451 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SMC1AQ14683 1233 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 MBTPS1Q14703 1052 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 NAA30Q147X3 362 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SLMAPQ14BN4 828 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC25A52Q3SY17 297 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 WSCD1Q658N2 575 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PM20D1Q6GTS8 502 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PMF1Q6P1K2 205 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CNKSR3Q6P9H4 555 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CCDC137Q6PK04 289 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 LRIG3Q6UXM1 1119 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM183BPQ6ZVS7 135 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CRIPAKQ8N1N5 446 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF276Q8N554 614 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 NTAN1Q96AB6 310 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 HAUS1Q96CS2 278 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 FAF2Q96CS3 445 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC2A13Q96QE2 648 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PSMB7Q99436 277 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PKMYT1Q99640 499 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 FRMD8Q9BZ67 464 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 DMAP1Q9NPF5 467 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 METTL5Q9NRN9 209 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 LRFN2Q9ULH4 789 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 COL4A6Q14031 1691 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 hCG_1818297A0A087WSY0 165 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 TRIM66O15016 1216 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PAPSS1O43252 624 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 KRT1P04264 644 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RARAP10276 462 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 KDELR1P24390 212 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 STIP1P31948 543 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 HSPA9P38646 679 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 PTGIRP43119 386 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 GJA8P48165 433 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 YWHAZP63104 245 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 MRPS5P82675 430 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SCAPQ12770 1279 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 XRCC4Q13426 336 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 CASP8Q14790 479 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 TIGD5Q53EQ6 642 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RTN4RL1Q86UN2 441 aaPredicted RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 OSTM1Q86WC4 334 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 JAMLQ86YT9 394 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SIX6OS1Q8N1H7 587 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 SLC2A14Q8TDB8 520 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RXFP2Q8WXD0 754 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 ZNF333Q96JL9 665 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 DCLK3Q9C098 648 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 BRD8Q9H0E9 1235 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 RNF208Q9H0X6 261 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 EPB41L5Q9HCM4 733 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 MIOSQ9NXC5 875 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 DONSONQ9NYP3 566 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 DMGDHQ9UI17 866 aaKnown RBP7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 USP18Q9UMW8 372 aa7.16□□□□□ -1.26
ECHDC1-210ENST00000454859 APOC4-APOC2K7ER74 178 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 BAIAP3O94812 1187 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 C1RP00736 705 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 APOC2P02655 101 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 ALDH2P05091 517 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 MIPP30301 263 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 PSEN1P49768 467 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 ARSEP51690 589 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 TAS2R40P59535 323 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 GUCY2DQ02846 1103 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 YWHAHQ04917 246 aaPredicted RBP7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 MRPL58Q14197 206 aaKnown RBP7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 DPYSL2Q16555 572 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 HSP90B2PQ58FF3 399 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 SCARA3Q6AZY7 606 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 FAM35AQ86V20 835 aa7.15□□□□□ -1.26
ECHDC1-210ENST00000454859 CCDC105Q8IYK2 499 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms