RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 UAP1L1Q3KQV9 507 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 TMEM92Q6UXU6 159 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 OSTM1Q86WC4 334 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 HDDC3Q8N4P3 179 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 CCDC33Q8N5R6 958 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ALLCQ8N6M5 410 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 TXNDC5Q8NBS9 432 aaKnown RBP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 KBTBD7Q8WVZ9 684 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 MYLPFQ96A32 169 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 SAAL1Q96ER3 474 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 HPDLQ96IR7 371 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 ELOVL4Q9GZR5 314 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 KIAA1586Q9HCI6 787 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 INTS13Q9NVM9 706 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 BCCIPQ9P287 314 aaKnown RBP eCLIP15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 SIX4Q9UIU6 781 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 SLC6A14Q9UN76 642 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 PKD1L2Q7Z442 2459 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 PTPRDP23468 1912 aa15.25■□□□□ 0.03
LYSMD3-202ENST00000453259 TNRC6BQ9UPQ9 1833 aaKnown RBP15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 GCNT3O95395 438 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 KLF8O95600 359 aaPredicted RBP15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 SERPINF2P08697 491 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 ADH5P11766 374 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 BDNFP23560 247 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 ZXDBP98169 803 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 GFPT1Q06210 699 aaPredicted RBP15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 SLC14A1Q13336 389 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 COL9A2Q14055 689 aaPredicted RBP15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 SV2BQ7L1I2 683 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 DYMQ7RTS9 669 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 GPD1LQ8N335 351 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 ARHGEF4Q9NR80 690 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 CPQQ9Y646 472 aa15.24■□□□□ 0.03
LYSMD3-202ENST00000453259 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 FRMD3A2A2Y4 597 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 SGK1O00141 431 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 ZBTB24O43167 697 aaPredicted RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 HOXC11O43248 304 aaPredicted RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 ZNF217O75362 1048 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 TACC1O75410 805 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 RTN3O95197 1032 aaPredicted RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 SPINK2P20155 84 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 PTGER3P43115 390 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 TUBP50607 506 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 WNT7BP56706 349 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 SIM1P81133 766 aaPredicted RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 GAD2Q05329 585 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 KCNA1Q09470 495 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 SF3A1Q15459 793 aaKnown RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 BTBD8Q5XKL5 378 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 RHBDF2Q6PJF5 856 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 WDR49Q8IV35 697 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 TMEFF1Q8IYR6 380 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 PCED1BQ96HM7 432 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 PDE11AQ9HCR9 933 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 CRTAC1Q9NQ79 661 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 RALYQ9UKM9 306 aaKnown RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 ZFYVE26Q68DK2 2539 aa15.23■□□□□ 0.03
LYSMD3-202ENST00000453259 ZNF233A6NK53 670 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 OPHN1O60890 802 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 HNRNPLP14866 589 aaKnown RBP eCLIP15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 TIE1P35590 1138 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 MAPK8P45983 427 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 USP46P62068 366 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 PSMC1P62191 440 aaKnown RBP15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 TTC30AQ86WT1 665 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 PHTF2Q8N3S3 785 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 HMGB4Q8WW32 186 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 CBWD1Q9BRT8 395 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 RNF38Q9H0F5 515 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 CAPN10Q9HC96 672 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 TMEM74BQ9NUR3 256 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 CFAP97Q9P2B7 532 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 SMC3Q9UQE7 1217 aa15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 MORC2Q9Y6X9 1032 aaPredicted RBP15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 ASCC3Q8N3C0 2202 aaKnown RBP15.22■□□□□ 0.03
LYSMD3-202ENST00000453259 A0A1W2PQD8 194 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 TCRBV21S2A2A0A5A6 115 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 F8VP50 259 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 HYAL3O43820 417 aaPredicted RBP15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 ADAM23O75077 832 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 ATP2C2O75185 946 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 CFIP05156 583 aa15.21■□□□□ 0.03
LYSMD3-202ENST00000453259 SYPP08247 313 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms