RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CLEC1BQ9P126 229 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CALCOCO1Q9P1Z2 691 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TBC1D14Q9P2M4 693 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PI4KBQ9UBF8 816 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 TCFL5Q9UL49 500 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCDHA3Q9Y5H8 950 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCDHA13Q9Y5I0 950 aa4.75□□□□□ -1.65
HMGB3P21-201ENST00000452483 CLRN2A0PK11 232 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRSS38A1L453 326 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 FITM1A5D6W6 292 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 A8MXE2 369 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 H0Y8X5 98 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 IKBKBO14920 756 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADAM20O43506 726 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TBC1D4O60343 1298 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRT38O76015 456 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PNPP00491 289 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MT-ND5P03915 603 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 OPN1MWP04001 364 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TUBB4AP04350 444 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 OPN1MW2P0DN77 364 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 OPN1MW3P0DN78 364 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TBXAS1P24557 533 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 GRK5P34947 590 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PGM1P36871 562 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 WASP42768 502 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 IFNAR2P48551 515 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARFIP1P53367 373 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PNLIPRP1P54315 467 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCBP3P57721 371 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 RPP30P78346 268 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 HTD2P86397 168 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 DCTN2Q13561 401 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 SPIDRQ14159 915 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MORF4L2Q15014 288 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PPP1R7Q15435 360 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 KBTBD12Q3ZCT8 623 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF805Q5CZA5 627 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 KHDC1LQ5JSQ8 128 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TOR1AIP1Q5JTV8 583 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAXCQ5TGI0 409 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CPZQ66K79 652 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARL6IP4Q66PJ3 421 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CWF19L1Q69YN2 538 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM132EQ6IEE7 984 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CYP20A1Q6UW02 462 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MPZL3Q6UWV2 235 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ANGPTL8Q6UXH0 198 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARHGAP36Q6ZRI8 547 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARHGEF18Q6ZSZ5 1173 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 DENND5BQ6ZUT9 1274 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 H1FNTQ75WM6 255 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 RRAGAQ7L523 313 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 KSR1Q8IVT5 923 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCN4BQ8IWT1 228 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 DPP10Q8N608 796 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZBTB8BQ8NAP8 495 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCAMP5Q8TAC9 235 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM216AQ8WUB2 273 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MYLIPQ8WY64 445 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 KTI12Q96EK9 354 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CFAP36Q96G28 342 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 LIN37Q96GY3 246 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 WDR24Q96S15 920 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 NTPCRQ9BSD7 190 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 RTKNQ9BST9 563 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CRACR2AQ9BSW2 395 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADI1Q9BV57 179 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 NT5C3AQ9H0P0 336 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 SMARCAD1Q9H4L7 1026 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 OPA3Q9H6K4 179 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CHODLQ9H9P2 273 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 BRF2Q9HAW0 419 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CHST7Q9NS84 486 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 TBC1D23Q9NUY8 699 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 AATFQ9NY61 560 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 RGL1Q9NZL6 768 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MRPL15Q9P015 296 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 C5AR2Q9P296 337 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CPSF3Q9UKF6 684 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCDHA6Q9UN73 950 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 EXOC7Q9UPT5 735 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 MTO1Q9Y2Z2 717 aaKnown RBP4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 CCL27Q9Y4X3 112 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 PCDHB1Q9Y5F3 818 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 HS3ST4Q9Y661 456 aa4.74□□□□□ -1.65
HMGB3P21-201ENST00000452483 RUSC2Q8N2Y8 1516 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARPC4-TTLL3A0A0A6YYG9 625 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 ST20-MTHFSA0A0A6YYL1 179 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 TMEM82A0PJX8 343 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CTAGE9A4FU28 777 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 CLCA1A8K7I4 914 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 MEIS1O00470 390 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 AURKAO14965 403 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 PGRMC2O15173 223 aa4.73□□□□□ -1.65
HMGB3P21-201ENST00000452483 WDR46O15213 610 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms