RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 FBXO32Q969P5 355 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 KXD1Q9BQD3 176 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 RPP25Q9BUL9 199 aaKnown RBP9.38□□□□□ -0.91
COL8A1-203ENST00000452013 KIF9Q9HAQ2 790 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 TRPC7Q9HCX4 862 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 TDP1Q9NUW8 608 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 TSPAN16Q9UKR8 245 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 FBXL21Q9UKT6 434 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 DUSP12Q9UNI6 340 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 DAAM1Q9Y4D1 1078 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 COL6A3P12111 3177 aa9.38□□□□□ -0.91
COL8A1-203ENST00000452013 FAM92AA1XBS5 289 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 HEPACAM2A8MVW5 462 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 GOLGA6L19H0YKK7 550 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 O00370 1275 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF263O14978 683 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 GPR37L1O60883 481 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 TPM3P06753 285 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SETSIPP0DME0 302 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 PSMC3P17980 439 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 VIPR2P41587 438 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 PSEN1P49768 467 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 KIF11P52732 1056 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF132P52740 706 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 BCAT1P54687 386 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 GPC5P78333 572 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 UBXN1Q04323 297 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 BST2Q10589 180 aaKnown RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF268Q14587 947 aaPredicted RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 GOLGA7BQ2TAP0 167 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 HECTD3Q5T447 861 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SNX30Q5VWJ9 437 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 GJB7Q6PEY0 223 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 POTEHQ6S545 545 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 DHX40Q8IX18 779 aaKnown RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 ARHGAP18Q8N392 663 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 UBA3Q8TBC4 463 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 BPIFB1Q8TDL5 484 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 IRF7Q92985 503 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 LSM14BQ9BX40 385 aaKnown RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 STK33Q9BYT3 514 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 PLA2G2FQ9BZM2 168 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 BRD9Q9H8M2 597 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 LRRC4Q9HBW1 653 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SIX2Q9NPC8 291 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SLC2A4RGQ9NR83 387 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 TLR8Q9NR97 1041 aaKnown RBP9.37□□□□□ -0.91
COL8A1-203ENST00000452013 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 SCML2Q9UQR0 700 aa9.37□□□□□ -0.91
COL8A1-203ENST00000452013 NCANO14594 1321 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 MYO9BQ13459 2157 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 TMEM221A6NGB7 291 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 LGALS16A8MUM7 142 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 HHLA1C9JL84 531 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 M0R296 226 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 FOXN3O00409 490 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CHADO15335 359 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 THAP12O43422 761 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 NARSO43776 548 aaKnown RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 SERPINC1P01008 464 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CKMP06732 381 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CFHP08603 1231 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 RALAP11233 206 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 UCHL3P15374 230 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 FCARP24071 287 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 GNA15P30679 374 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 GDI1P31150 447 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 PDE4CQ08493 712 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 RAPGEF1Q13905 1077 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 IQCB1Q15051 598 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 MEA1Q16626 185 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 VITQ6UXI7 678 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 BMP8AQ7Z5Y6 402 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 TADA2BQ86TJ2 420 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 PIGZQ86VD9 579 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 TTC30AQ86WT1 665 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 GPIHBP1Q8IV16 184 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 ARL14EPQ8N8R7 260 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
COL8A1-203ENST00000452013 NEK11Q8NG66 645 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 ZNF606Q8WXB4 792 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 KCTD13Q8WZ19 329 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 TFAP2BQ92481 460 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 SHC3Q92529 594 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 SHDQ96IW2 340 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 HSFY1Q96LI6 401 aa9.36□□□□□ -0.91
COL8A1-203ENST00000452013 CYP2S1Q96SQ9 504 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms