RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 STIM1Q13586 685 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 LRRC32Q14392 662 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CBWD6Q4V339 395 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CBWD3Q5JTY5 395 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CBWD5Q5RIA9 395 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 KRT39Q6A163 491 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 PAQR9Q6ZVX9 377 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 RALGPS2Q86X27 583 aaPredicted RBP10.27□□□□□ -0.77
USP54-207ENST00000451492 FUKQ8N0W3 1084 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 NUP93Q8N1F7 819 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 TMEM174Q8WUU8 243 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 SEMA4DQ92854 862 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CLDN23Q96B33 292 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 SMOQ99835 787 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 ARID3AQ99856 593 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 TTLL2Q9BWV7 592 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 CHRDQ9H2X0 955 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 GMIPQ9P107 970 aa10.27□□□□□ -0.77
USP54-207ENST00000451492 ZNF840PA6NDX5 716 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 LEFTY2O00292 366 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 PSMA7O14818 248 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 SLC16A3O15427 465 aaKnown RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 RTN3O95197 1032 aaPredicted RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 FAM163BP0C2L3 166 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 FAM200BP0CF97 657 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 HOXC13P31276 330 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 STX17P56962 302 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 ZXDBP98169 803 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 LRMPQ12912 555 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 GAS6Q14393 721 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 ZNF268Q14587 947 aaPredicted RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 HEATR6Q6AI08 1181 aaKnown RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 GPRIN1Q7Z2K8 1008 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 ADSSL1Q8N142 457 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 CPA6Q8N4T0 437 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 FBXL13Q8NEE6 735 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 ZMIZ2Q8NF64 920 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 OSCP1Q8WVF1 389 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 CHFRQ96EP1 664 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 MSANTD3Q96H12 275 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 TIGD1Q96MW7 591 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 FAM83CQ9BQN1 747 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 NACA2Q9H009 215 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 RNF38Q9H0F5 515 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 PRMT8Q9NR22 394 aaPredicted RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 GCNT4Q9P109 453 aa10.26□□□□□ -0.77
USP54-207ENST00000451492 CHORDC1Q9UHD1 332 aaPredicted RBP10.26□□□□□ -0.77
USP54-207ENST00000451492 CYP26A1O43174 497 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 STX10O60499 249 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CILPO75339 1184 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 OAS1P00973 400 aaKnown RBP10.25□□□□□ -0.77
USP54-207ENST00000451492 EGFP01133 1207 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 LMNAP02545 664 aaKnown RBP10.25□□□□□ -0.77
USP54-207ENST00000451492 GJA4P35212 333 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 PDE6CP51160 858 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CCR3P51677 355 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 FKBP3Q00688 224 aaKnown RBP10.25□□□□□ -0.77
USP54-207ENST00000451492 INCA1Q0VD86 236 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 PDGFRLQ15198 375 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CAMK4Q16566 473 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 LPAL2Q16609 132 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 EML3Q32P44 896 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 PPP1R26Q5T8A7 1209 aaPredicted RBP10.25□□□□□ -0.77
USP54-207ENST00000451492 PKN3Q6P5Z2 889 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CLEC20AQ6ZU45 233 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 FILIP1Q7Z7B0 1213 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 UNC93AQ86WB7 457 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 PDZD8Q8NEN9 1154 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 SPATA20Q8TB22 786 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 WHAMMQ8TF30 809 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 NELFBQ8WX92 580 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 ATRIPQ8WXE1 791 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 TATDN2Q93075 761 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 ATP2A3Q93084 1043 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CYFIP2Q96F07 1278 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CEP295NLQ96MC4 621 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 NT5C1AQ9BXI3 368 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 LINC00597Q9H2U6 94 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 ECT2Q9H8V3 914 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 C2orf42Q9NWW7 574 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 RAB20Q9NX57 234 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 FBXO4Q9UKT5 387 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 CIZ1Q9ULV3 898 aaPredicted RBP10.25□□□□□ -0.77
USP54-207ENST00000451492 ARHGAP26Q9UNA1 814 aa10.25□□□□□ -0.77
USP54-207ENST00000451492 WDR87Q6ZQQ6 2873 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 SOBPA7XYQ1 873 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 TNFRSF10BO14763 440 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 COCHO43405 550 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 RNF40O75150 1001 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 NFATC1O95644 943 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
USP54-207ENST00000451492 GTF2H1P32780 548 aa10.24□□□□□ -0.77
USP54-207ENST00000451492 CXCL12P48061 93 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms