RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SDC4P31431 198 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 RFC2P35250 354 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 MAP3K7CLP57077 242 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 GUCY2DQ02846 1103 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 YWHAHQ04917 246 aaPredicted RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 KLF1Q13351 362 aaPredicted RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 SMC1AQ14683 1233 aaKnown RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 CCDC14Q49A88 953 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 ODF2Q5BJF6 829 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 BEND6Q5SZJ8 279 aaPredicted RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 TXNRD3NBQ6F5E7 133 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 C12orf50Q8NA57 414 aaPredicted RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 CLEC4CQ8WTT0 213 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 SMARCD1Q96GM5 515 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 SLITRK1Q96PX8 696 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 NRDE2Q9H7Z3 1164 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 GDF3Q9NR23 364 aa14.96□□□□□ -0.02
USP39-207ENST00000450066 PRG3Q9Y2Y8 225 aaPredicted RBP14.96□□□□□ -0.02
USP39-207ENST00000450066 MKI67P46013 3256 aaKnown RBP14.95□□□□□ -0.02
USP39-207ENST00000450066 TADA2AO75478 443 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 OAZ2O95190 189 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 DESP17661 470 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 IL1R2P27930 398 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 PTPN7P35236 360 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 LBX1P52954 281 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 TSPY1Q01534 308 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 ADIGQ0VDE8 80 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 DHX34Q14147 1143 aaKnown RBP14.95□□□□□ -0.02
USP39-207ENST00000450066 MAP9Q49MG5 647 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 EFHC1Q5JVL4 640 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 ZFYVE27Q5T4F4 411 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 OR10T2Q8NGX3 314 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 MYLPFQ96A32 169 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 MAGOHBQ96A72 148 aaKnown RBP14.95□□□□□ -0.02
USP39-207ENST00000450066 RNF25Q96BH1 459 aaPredicted RBP14.95□□□□□ -0.02
USP39-207ENST00000450066 PAWRQ96IZ0 340 aaKnown RBP14.95□□□□□ -0.02
USP39-207ENST00000450066 CFAP57Q96MR6 1250 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 RUNDC3BQ96NL0 473 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 SMOQ99835 787 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 HINFPQ9BQA5 517 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 LRRC19Q9H756 370 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 LRRC4Q9HBW1 653 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 CSNK1G1Q9HCP0 422 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 PCYOX1Q9UHG3 505 aa14.95□□□□□ -0.02
USP39-207ENST00000450066 NRP1O14786 923 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 ALDH2P05091 517 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 CAPN2P17655 700 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 PTPN9P43378 593 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 GATMP50440 423 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 DR1Q01658 176 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 IKBKEQ14164 716 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 CNKSR3Q6P9H4 555 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 HERPUD2Q9BSE4 406 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 EPB41L5Q9HCM4 733 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 HOMER3Q9NSC5 361 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 KLHL11Q9NVR0 708 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 ADAM28Q9UKQ2 775 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 USP18Q9UMW8 372 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 BHMG1C9JSJ3 638 aaPredicted RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 PI4K2BG5E9Z4 385 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 SYN3O14994 580 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 TTI1O43156 1089 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 HSF2BPO75031 334 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 FBXO21O94952 628 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 SEC31AO94979 1220 aaKnown RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 TRUB2O95900 331 aaKnown RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 FNTAP49354 379 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 MRPS5P82675 430 aaKnown RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 LLGL1Q15334 1064 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 LRRC26Q2I0M4 334 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 C15orf59Q2T9L4 293 aaPredicted RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 TFDP3Q5H9I0 405 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 RAB41Q5JT25 222 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 SH3PXD2AQ5TCZ1 1133 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 MFSD7Q6UXD7 560 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 SPOCD1Q6ZMY3 1216 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 ANKS1BQ7Z6G8 1248 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 LRRTM3Q86VH5 581 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 SIX6OS1Q8N1H7 587 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 ZMIZ2Q8NF64 920 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 CMASQ8NFW8 434 aaPredicted RBP14.94□□□□□ -0.02
USP39-207ENST00000450066 RAPGEF5Q92565 580 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 KCNK16Q96T55 309 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 COLEC11Q9BWP8 271 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 HEMGNQ9BXL5 484 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 ZWILCHQ9H900 591 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 PCSK1NQ9UHG2 260 aa14.94□□□□□ -0.02
USP39-207ENST00000450066 LRRD1A4D1F6 860 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 ZSCAN5CA6NGD5 496 aaPredicted RBP14.93□□□□□ -0.02
USP39-207ENST00000450066 C3orf70A6NLC5 250 aaPredicted RBP14.93□□□□□ -0.02
USP39-207ENST00000450066 TBKBP1A7MCY6 615 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 ATP8B1O43520 1251 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 MYBL2P10244 700 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 CDKN2BP42772 138 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 TKTL1P51854 596 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 CACNA2D1P54289 1103 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 SMTNL2Q2TAL5 461 aa14.93□□□□□ -0.02
USP39-207ENST00000450066 KCNT1Q5JUK3 1230 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms