RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 ATP8B3O60423 1300 aa26.57■■□□□ 1.84
HTATSF1-203ENST00000448450 F5P12259 2224 aa26.57■■□□□ 1.84
HTATSF1-203ENST00000448450 HEPACAM2A8MVW5 462 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 LILRB5O75023 590 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 CILPO75339 1184 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 CCDC192P0DO97 292 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 TPD52L1Q16890 204 aaPredicted RBP26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 TXNDC8Q6A555 127 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 VITQ6UXI7 678 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 SMG9Q9H0W8 520 aaKnown RBP26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 TRPV4Q9HBA0 871 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 GREB1Q4ZG55 1949 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 SPTBN2O15020 2390 aa26.56■■□□□ 1.84
HTATSF1-203ENST00000448450 DENND4CQ5VZ89 1909 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 MYH10P35580 1976 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 MAN2B1O00754 1011 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 AP1G2O75843 785 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 ADORA2BP29275 332 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 KCNH2Q12809 1159 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 IFRD2Q12894 506 aaPredicted RBP26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 TSSK4Q6SA08 328 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 SMARCD1Q96GM5 515 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 TRMT61BQ9BVS5 477 aaKnown RBP26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 KRT82Q9NSB4 513 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 CISHQ9NSE2 258 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 NCANO14594 1321 aa26.55■■□□□ 1.84
HTATSF1-203ENST00000448450 DPYSL4O14531 572 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 TADA3O75528 432 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 TRIM21P19474 475 aaKnown RBP26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 MARSP56192 900 aaKnown RBP26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 LMNB2Q03252 620 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 MTAPQ13126 283 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 CYFIP2Q96F07 1278 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 FAXDC2Q96IV6 333 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 CNOT6LQ96LI5 555 aaKnown RBP26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 TRPC7Q9HCX4 862 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 NDRG2Q9UN36 371 aaKnown RBP26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 TICRRQ7Z2Z1 1910 aa26.54■■□□□ 1.84
HTATSF1-203ENST00000448450 COL4A2P08572 1712 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 ZNF638Q14966 1978 aaKnown RBP26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 PRAMEF12O95522 483 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 AFPP02771 609 aaKnown RBP26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 PSMC3P17980 439 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 GDI1P31150 447 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 CETN1Q12798 172 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 FZD5Q13467 585 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 CUL2Q13617 745 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 PPP2R5DQ14738 602 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 MFSD6LQ8IWD5 586 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 CMTM8Q8IZV2 173 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 IRF7Q92985 503 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 CEP295NLQ96MC4 621 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 HEXIM2Q96MH2 286 aaKnown RBP26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 DMAP1Q9NPF5 467 aaPredicted RBP26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 DACH1Q9UI36 760 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 OBSL1O75147 1896 aa26.53■■□□□ 1.84
HTATSF1-203ENST00000448450 BEST1O76090 585 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 TPRP12270 2363 aaKnown RBP26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 MAP3K7CLP57077 242 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 MON1AQ86VX9 555 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 IRF2BP1Q8IU81 584 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 YAF2Q8IY57 180 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 NUP93Q8N1F7 819 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 E2F7Q96AV8 911 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 LRRC3BQ96PB8 259 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 HNRNPABQ99729 332 aaKnown RBP26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 SMOQ99835 787 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 IER2Q9BTL4 223 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 DNAI2Q9GZS0 605 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 CHRDQ9H2X0 955 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 GMEB2Q9UKD1 530 aa26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 CDV3Q9UKY7 258 aaKnown RBP26.52■■□□□ 1.84
HTATSF1-203ENST00000448450 CACNA1BQ00975 2339 aa26.51■■□□□ 1.84
HTATSF1-203ENST00000448450 SHISA7A6NL88 538 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 PRR5-ARHGAP8B1AHC4 643 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 PMM2O15305 246 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 DDX6P26196 483 aaKnown RBP eCLIP26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 AVPR1AP37288 418 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 RAD23BP54727 409 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 NRLP54845 237 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 ARHGAP8P85298 464 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 TTC39CQ8N584 583 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 SLC4A11Q8NBS3 891 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 EHBP1Q8NDI1 1231 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 DEPDC1BQ8WUY9 529 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 NT5C1BQ96P26 610 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 CYP2S1Q96SQ9 504 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 TTLL2Q9BWV7 592 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 EHD2Q9NZN4 543 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 TRPM5Q9NZQ8 1165 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 USP18Q9UMW8 372 aa26.51■■□□□ 1.83
HTATSF1-203ENST00000448450 ZNF263O14978 683 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 P4HA2O15460 535 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 ABL1P00519 1130 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 FAM200BP0CF97 657 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 ERCC5P28715 1186 aaPredicted RBP26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 TAF10Q12962 218 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 HSP90AA4PQ58FG1 418 aa26.5■■□□□ 1.83
HTATSF1-203ENST00000448450 ZMIZ2Q8NF64 920 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms