RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 PPEF2O14830 753 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 F2P00734 622 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 MPP2Q14168 576 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SH3PXD2AQ5TCZ1 1133 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 ALKAL1Q6UXT8 129 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 CCDC121Q6ZUS5 278 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 NAT8LQ8N9F0 302 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 CCDC197Q8NCU1 140 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 P3H4Q92791 437 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 PTPN18Q99952 460 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 EIF2AQ9BY44 585 aaKnown RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 C10orf88Q9H8K7 445 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 TBK1Q9UHD2 729 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 NME7Q9Y5B8 376 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SNX9Q9Y5X1 595 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 EXOC1LA0A1B0GW35 172 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SMIM10L2AP0DMW4 78 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SMIM10L2BP0DMW5 78 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 EIF3EP60228 445 aaKnown RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 TMEM62Q0P6H9 643 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 NR1H3Q13133 447 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 IRF5Q13568 498 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 ITIH4Q14624 930 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 RASA2Q15283 850 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 NOTUMQ6P988 496 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 TMEM110Q86TL2 294 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 TTC30AQ86WT1 665 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 UNC45BQ8IWX7 931 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 RSAD2Q8WXG1 361 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
OTUB1-204ENST00000447683 PPCSQ9HAB8 311 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 KCNK9Q9NPC2 374 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
OTUB1-204ENST00000447683 SMAPO00193 183 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 DARSP14868 501 aaKnown RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 PDIA2Q13087 525 aaKnown RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 LRRC14Q15048 493 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 HIF1AQ16665 826 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 C15orf59Q2T9L4 293 aaPredicted RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 PMF1Q6P1K2 205 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 OLFML1Q6UWY5 402 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 ACOT1Q86TX2 421 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 UNC93AQ86WB7 457 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 CCDC13Q8IYE1 715 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 ZBED8Q8IZ13 594 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 BEST2Q8NFU1 509 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 CKAP2Q8WWK9 683 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 KAT2BQ92831 832 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 PAIP2Q9BPZ3 127 aaKnown RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 CALN1Q9BXU9 219 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 NSRP1Q9H0G5 558 aaKnown RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 TUBGCP4Q9UGJ1 667 aa17.02■□□□□ 0.32
OTUB1-204ENST00000447683 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
OTUB1-204ENST00000447683 PIK3R2O00459 728 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 MCF2LO15068 1137 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 VIMP08670 466 aaKnown RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 YARSP54577 528 aaKnown RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 CDH6P55285 790 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 ACTN3Q08043 901 aaPredicted RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 MMRN1Q13201 1228 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 DPYSL3Q14195 570 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 CRYMQ14894 314 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 NOMO1Q15155 1222 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 CCDC14Q49A88 953 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 LACTB2Q53H82 288 aaPredicted RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 RAB6CQ53S08 254 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 ANKRD22Q5VYY1 191 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 SRRM1Q8IYB3 904 aaKnown RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 STK32AQ8WU08 396 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 DYDC1Q8WWB3 177 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 CCT6BQ92526 530 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 USP6NLQ92738 828 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 KHSRPQ92945 711 aaKnown RBP eCLIP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 RAB6CQ9H0N0 254 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 ZMYND8Q9ULU4 1186 aaPredicted RBP17.02■□□□□ 0.31
OTUB1-204ENST00000447683 GINS2Q9Y248 185 aa17.02■□□□□ 0.31
OTUB1-204ENST00000447683 E7ESA3 106 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 RBP3P10745 1247 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 RDXP35241 583 aaKnown RBP17.01■□□□□ 0.31
OTUB1-204ENST00000447683 RGS7P49802 495 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 FAM47CQ5HY64 1035 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 ARHGAP17Q68EM7 881 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 TRABD2AQ86V40 505 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 SPATA18Q8TC71 538 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 MGARPQ8TDB4 240 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 OSMRQ99650 979 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 ACTR5Q9H9F9 607 aaPredicted RBP17.01■□□□□ 0.31
OTUB1-204ENST00000447683 UBN1Q9NPG3 1134 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 SLC5A4Q9NY91 659 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 SAMD15Q9P1V8 674 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 CAPN7Q9Y6W3 813 aa17.01■□□□□ 0.31
OTUB1-204ENST00000447683 GOLGA6L7A0A1B0GV03 622 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms