RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 NDUFA5Q16718 116 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 LRRC36Q1X8D7 754 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 PGM2L1Q6PCE3 622 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 GPBP1Q86WP2 473 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 GSTCDQ8NEC7 633 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 EME1Q96AY2 570 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 C7orf26Q96N11 449 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 HGH1Q9BTY7 390 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 MKNK1Q9BUB5 465 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 CCDC106Q9BWC9 280 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ARMCX1Q9P291 453 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 APEX2Q9UBZ4 518 aa20■□□□□ 0.79
HMGA1-205ENST00000447654 ALOX15BO15296 676 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 CYP1A2P05177 515 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 AOC1P19801 751 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 HMOX2P30519 316 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 ALDH3B2P48448 385 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 CCNIQ14094 377 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 C16orf72Q14CZ0 275 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF829Q3KNS6 432 aaPredicted RBP19.99■□□□□ 0.79
HMGA1-205ENST00000447654 ARSHQ5FYA8 562 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 GMCL1P1Q8NEA9 526 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 SLC26A7Q8TE54 656 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 GMLQ99445 158 aa19.99■□□□□ 0.79
HMGA1-205ENST00000447654 CLASP2O75122 1294 aaKnown RBP19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ESRRBO95718 433 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 OCM2P0CE71 109 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 OCMP0CE72 109 aaPredicted RBP19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ALDH1A3P47895 512 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 MYBPC1Q00872 1141 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 GRAMD1BQ3KR37 738 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 DCDC5Q6ZRR9 648 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 FBXO27Q8NI29 283 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 PPP1R14CQ8TAE6 165 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ACER1Q8TDN7 264 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 CRYGNQ8WXF5 182 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 DCUN1D1Q96GG9 259 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 PWWP2AQ96N64 755 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ANO3Q9BYT9 981 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 PPME1Q9Y570 386 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 SRCAPQ6ZRS2 3230 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 SERPINA6P08185 405 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 NFKBIAP25963 317 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 PRDX6P30041 224 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 STAT3P40763 770 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 RSBN1LQ6PCB5 846 aaPredicted RBP19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ADGRD1Q6QNK2 874 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF564Q8TBZ8 553 aaPredicted RBP19.98■□□□□ 0.79
HMGA1-205ENST00000447654 STARD8Q92502 1023 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 DHRS4Q9BTZ2 278 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 PPARGC1AQ9UBK2 798 aaKnown RBP19.98■□□□□ 0.79
HMGA1-205ENST00000447654 STRIP2Q9ULQ0 834 aa19.98■□□□□ 0.79
HMGA1-205ENST00000447654 IQCA1LA6NCM1 817 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ATMINO43313 823 aaPredicted RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SRGAP2CP0DJJ0 459 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SRGAP2BP0DMP2 458 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CYP2C9P11712 490 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PTPN2P17706 415 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ENTPD1P49961 510 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 HIRAP54198 1017 aaPredicted RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SEPT6Q14141 434 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CNGA3Q16281 694 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PALB2Q86YC2 1186 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SDR16C5Q8N3Y7 309 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 OGFOD1Q8N543 542 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 TTLL6Q8N841 843 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 TTC13Q8NBP0 860 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 GCNAQ96QF7 691 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CCDC68Q9H2F9 335 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 VPS45Q9NRW7 570 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PCDHA12Q9UN75 941 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SCAF8Q9UPN6 1271 aaKnown RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CNTNAP1P78357 1384 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 OXSR1O95747 527 aaPredicted RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ATP6V1B1P15313 513 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 DPEP1P16444 411 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 KLRC2P26717 231 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 FMO5P49326 533 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CCT8P50990 548 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ZNF200P98182 395 aaPredicted RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 SNRNP48Q6IEG0 339 aaKnown RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ELMSAN1Q6PJG2 1045 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PRPF39Q86UA1 669 aaKnown RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 ALYREFQ86V81 257 aaKnown RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 DDHD1Q8NEL9 900 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CHPT1Q8WUD6 406 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 HEPHQ9BQS7 1158 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
HMGA1-205ENST00000447654 CDH7Q9ULB5 785 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PSMD13Q9UNM6 376 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 INPP5FQ9Y2H2 1132 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 PSME4Q14997 1843 aa19.97■□□□□ 0.79
HMGA1-205ENST00000447654 WDR91A4D1P6 747 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 RAG1P15918 1043 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 CDH3P22223 829 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 ACAT1P24752 427 aaKnown RBP19.96■□□□□ 0.79
HMGA1-205ENST00000447654 ADSSP30520 456 aa19.96■□□□□ 0.79
HMGA1-205ENST00000447654 PSMC2P35998 433 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms