RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 UBALD2Q8IYN6 164 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 UBA3Q8TBC4 463 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 TFAP2BQ92481 460 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 NXPE3Q969Y0 559 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 ELSPBP1Q96BH3 223 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 SLC22A12Q96S37 553 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 GPR88Q9GZN0 384 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 TRPM5Q9NZQ8 1165 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 GMIPQ9P107 970 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 DNAJC12Q9UKB3 198 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 FBXL21Q9UKT6 434 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 CA14Q9ULX7 337 aa12.6□□□□□ -0.39
RFC4-208ENST00000447345 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 HEPACAM2A8MVW5 462 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 BECN2A8MW95 431 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 HHLA1C9JL84 531 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 M0QYV0 167 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 O00370 1275 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 DPYSL4O14531 572 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 CYP26A1O43174 497 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ECI2O75521 394 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 PAEPP09466 180 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 SRFP11831 508 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ZNF18P17022 549 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ZNF132P52740 706 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 RAPGEF1Q13905 1077 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 FKBP15Q5T1M5 1219 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ENOSF1Q7L5Y1 443 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
RFC4-208ENST00000447345 PCMTD1Q96MG8 357 aaPredicted RBP12.59□□□□□ -0.39
RFC4-208ENST00000447345 CYP2S1Q96SQ9 504 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ZSWIM1Q9BR11 485 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 ACP6Q9NPH0 428 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 C11orf16Q9NQ32 467 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 LIMA1Q9UHB6 759 aaKnown RBP12.59□□□□□ -0.39
RFC4-208ENST00000447345 CCL26Q9Y258 94 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
RFC4-208ENST00000447345 TMEM221A6NGB7 291 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 SMTNL1A8MU46 457 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 LGALS16A8MUM7 142 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 M0R296 226 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 TULP2O00295 520 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 THAP12O43422 761 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 PDGFBP01127 241 aaPredicted RBP12.58□□□□□ -0.4
RFC4-208ENST00000447345 DDX6P26196 483 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFC4-208ENST00000447345 GDI1P31150 447 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 BCAT1P54687 386 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 SLC8A3P57103 927 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 GPC5P78333 572 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 PDE4CQ08493 712 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 PIGZQ86VD9 579 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 MON1AQ86VX9 555 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 YAF2Q8IY57 180 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 ANKRD52Q8NB46 1076 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
RFC4-208ENST00000447345 ZFYVE19Q96K21 471 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 FAM81BQ96LP2 452 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 BRD9Q9H8M2 597 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
RFC4-208ENST00000447345 SMPD4Q9NXE4 827 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
RFC4-208ENST00000447345 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.58□□□□□ -0.4
RFC4-208ENST00000447345 MYOFQ9NZM1 2061 aa12.58□□□□□ -0.4
RFC4-208ENST00000447345 ZNF840PA6NDX5 716 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 PIK3R2O00459 728 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 PSMC3P17980 439 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 HDCP19113 662 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 GNA15P30679 374 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 PGFP49763 221 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 RGS7P49802 495 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 UBXN1Q04323 297 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 BST2Q10589 180 aaKnown RBP12.57□□□□□ -0.4
RFC4-208ENST00000447345 IQCB1Q15051 598 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 SYCP1Q15431 976 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 TMEM31Q5JXX7 168 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 IER5LQ5T953 404 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 APTXQ7Z2E3 356 aaKnown RBP12.57□□□□□ -0.4
RFC4-208ENST00000447345 SIX5Q8N196 739 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 PDZD8Q8NEN9 1154 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 RIN3Q8TB24 985 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 DEPDC1BQ8WUY9 529 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 SHC3Q92529 594 aa12.57□□□□□ -0.4
RFC4-208ENST00000447345 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
RFC4-208ENST00000447345 ASIC4Q96FT7 647 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms