RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 PFKLP17858 780 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 ASPAP45381 313 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 GCLMP48507 274 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 FNTBP49356 437 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 NDST1P52848 882 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 SLC7A9P82251 487 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 ADAM9Q13443 819 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 FAM35AQ86V20 835 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 FUKQ8N0W3 1084 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 FMR1NBQ8N0W7 255 aaPredicted RBP22.05■■□□□ 1.12
SDC1-205ENST00000447124 ZMIZ2Q8NF64 920 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 SCAMP5Q8TAC9 235 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 TAF4BQ92750 862 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 IL37Q9NZH6 218 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 EHD2Q9NZN4 543 aa22.05■■□□□ 1.12
SDC1-205ENST00000447124 CHORDC1Q9UHD1 332 aaPredicted RBP22.05■■□□□ 1.12
SDC1-205ENST00000447124 BEST1O76090 585 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 ABL1P00519 1130 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 OAS1P00973 400 aaKnown RBP22.04■■□□□ 1.12
SDC1-205ENST00000447124 PPP3CCP48454 512 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 IFNAR2P48551 515 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 GRSF1Q12849 480 aaKnown RBP eCLIP22.04■■□□□ 1.12
SDC1-205ENST00000447124 IFRD2Q12894 506 aaPredicted RBP22.04■■□□□ 1.12
SDC1-205ENST00000447124 PNOCQ13519 176 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 PPP2R5DQ14738 602 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 FAM186BQ8IYM0 893 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 ENGASEQ8NFI3 743 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 TAS1R2Q8TE23 839 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 EZH1Q92800 747 aaPredicted RBP22.04■■□□□ 1.12
SDC1-205ENST00000447124 TNIP3Q96KP6 325 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 TWNKQ96RR1 684 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 SMOQ99835 787 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 HINFPQ9BQA5 517 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 MED10Q9BTT4 135 aa22.04■■□□□ 1.12
SDC1-205ENST00000447124 POLR3BQ9NW08 1133 aaPredicted RBP22.04■■□□□ 1.12
SDC1-205ENST00000447124 SMG5Q9UPR3 1016 aaKnown RBP22.04■■□□□ 1.12
SDC1-205ENST00000447124 CLSTN1O94985 981 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 RPL13P26373 211 aaKnown RBP22.03■■□□□ 1.12
SDC1-205ENST00000447124 YWHAQP27348 245 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 PSMC2P35998 433 aaKnown RBP22.03■■□□□ 1.12
SDC1-205ENST00000447124 SRSF5Q13243 272 aaKnown RBP22.03■■□□□ 1.12
SDC1-205ENST00000447124 INTS8Q75QN2 995 aaKnown RBP22.03■■□□□ 1.12
SDC1-205ENST00000447124 CPA6Q8N4T0 437 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 C12orf29Q8N999 325 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 EEF2KMTQ96G04 330 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 P2RY13Q9BPV8 354 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 CPQQ9Y646 472 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 CEP250Q9BV73 2442 aa22.03■■□□□ 1.12
SDC1-205ENST00000447124 SDK1Q7Z5N4 2213 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 P4HA1P13674 534 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 CCDC130P13994 396 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 PIK3CAP42336 1068 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 PGFP49763 221 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 PDE6CP51160 858 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 AMPD2Q01433 879 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 GAB4Q2WGN9 574 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 HEATR6Q6AI08 1181 aaKnown RBP22.02■■□□□ 1.12
SDC1-205ENST00000447124 UNC93AQ86WB7 457 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 SLC2A14Q8TDB8 520 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 ATP2A3Q93084 1043 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 SLITRK1Q96PX8 696 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 SMPD4Q9NXE4 827 aa22.02■■□□□ 1.12
SDC1-205ENST00000447124 AP1G2O75843 785 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 RTN3O95197 1032 aaPredicted RBP22.01■■□□□ 1.11
SDC1-205ENST00000447124 TGM1P22735 817 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 HOXA6P31267 233 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 PRCPP42785 496 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 ID4P47928 161 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 ENPEPQ07075 957 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 BECN1Q14457 450 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 LPAL2Q16609 132 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 ADGRG2Q8IZP9 1017 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 WHAMMQ8TF30 809 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 SEMA4DQ92854 862 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 ERCC4Q92889 916 aaPredicted RBP22.01■■□□□ 1.11
SDC1-205ENST00000447124 FBXO32Q969P5 355 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 SMARCD1Q96GM5 515 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 MMRN2Q9H8L6 949 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 CSNK1G1Q9HCP0 422 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 NCDNQ9UBB6 729 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 DCHS1Q96JQ0 3298 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 DMXL1Q9Y485 3027 aa22.01■■□□□ 1.11
SDC1-205ENST00000447124 FAM92AA1XBS5 289 aa22■■□□□ 1.11
SDC1-205ENST00000447124 ANTXRLA6NF34 631 aa22■■□□□ 1.11
SDC1-205ENST00000447124 SCAMP3O14828 347 aaKnown RBP22■■□□□ 1.11
SDC1-205ENST00000447124 RNF40O75150 1001 aa22■■□□□ 1.11
SDC1-205ENST00000447124 ZDHHC11BP0C7U3 371 aa22■■□□□ 1.11
SDC1-205ENST00000447124 KRT13P13646 458 aa22■■□□□ 1.11
SDC1-205ENST00000447124 DRD1P21728 446 aa22■■□□□ 1.11
SDC1-205ENST00000447124 SLC5A3P53794 718 aa22■■□□□ 1.11
SDC1-205ENST00000447124 NUCB2P80303 420 aa22■■□□□ 1.11
SDC1-205ENST00000447124 EDRF1Q3B7T1 1238 aa22■■□□□ 1.11
SDC1-205ENST00000447124 SNX30Q5VWJ9 437 aa22■■□□□ 1.11
SDC1-205ENST00000447124 LONP2Q86WA8 852 aa22■■□□□ 1.11
SDC1-205ENST00000447124 CD101Q93033 1021 aa22■■□□□ 1.11
SDC1-205ENST00000447124 RMDN1Q96DB5 314 aa22■■□□□ 1.11
SDC1-205ENST00000447124 DMAP1Q9NPF5 467 aaPredicted RBP22■■□□□ 1.11
SDC1-205ENST00000447124 KRT82Q9NSB4 513 aa22■■□□□ 1.11
SDC1-205ENST00000447124 FAM49BQ9NUQ9 324 aa22■■□□□ 1.11
SDC1-205ENST00000447124 ATP8B3O60423 1300 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms