RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CARNS1A5YM72 827 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PI4K2BG5E9Z4 385 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 SMAPO00193 183 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PITPNM1O00562 1244 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 GABRDO14764 452 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CAPN9O14815 690 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 AP1G2O75843 785 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 POMCP01189 267 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 FGFR1P11362 822 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 MIPP30301 263 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 ADCY8P40145 1251 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PTGIRP43119 386 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 AARSP49588 968 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS50-205ENST00000441602 EIF3BP55884 814 aaKnown RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 CBX1P83916 185 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 SNX1Q13596 522 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 OVOS1Q6IE37 1185 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 MFSD7Q6UXD7 560 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 BBS12Q6ZW61 710 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 BZW1Q7L1Q6 419 aaKnown RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 GSPT2Q8IYD1 628 aaKnown RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 EMC1Q8N766 993 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 C12orf29Q8N999 325 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 ACBD6Q9BR61 282 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 KRT82Q9NSB4 513 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PCSK1NQ9UHG2 260 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CYTH4Q9UIA0 394 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 C9IYK1 514 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 LRCH4O75427 683 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CYP11A1P05108 521 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 KDELR1P24390 212 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 ARL4AP40617 200 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CLCNKBP51801 687 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CDH6P55285 790 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PMF1Q6P1K2 205 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 OLFML1Q6UWY5 402 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 STRADAQ7RTN6 431 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PCGF5Q86SE9 256 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 ZNF598Q86UK7 904 aaKnown RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 PIGZQ86VD9 579 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 HOOK3Q86VS8 718 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PSTKQ8IV42 348 aaKnown RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 MYCBPAPQ8TBZ2 947 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 FAM172AQ8WUF8 416 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 UBLCP1Q8WVY7 318 aaPredicted RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 RSAD2Q8WXG1 361 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 SEC14L1Q92503 715 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 HSPH1Q92598 858 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 SUSD3Q96L08 255 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 CALN1Q9BXU9 219 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
VPS50-205ENST00000441602 DPEP3Q9H4B8 488 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
VPS50-205ENST00000441602 THSD7BQ9C0I4 1608 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 A6NNZ2 444 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 ZNF487B1APH4 448 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TMEM189-UBE2V1I3L0A0 370 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 KRT14P02533 472 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 ZNF135P52742 658 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 PLTPP55058 493 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 VCPP55072 806 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 FAM189BP81408 668 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 OGDHQ02218 1023 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 BYSLQ13895 437 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 NFE2Q16621 373 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 UPP1Q16831 310 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TUBB8Q3ZCM7 444 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 INTS6LQ5JSJ4 861 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 AADACL2Q6P093 401 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 C4orf22Q6V702 233 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 CPNE8Q86YQ8 564 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 SPATA2LQ8IUW3 424 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 ARFGAP2Q8N6H7 521 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 IRGQQ8WZA9 623 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 DDX23Q9BUQ8 820 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 RNF208Q9H0X6 261 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 PLEKHA4Q9H4M7 779 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 DMAP1Q9NPF5 467 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 CNGB3Q9NQW8 809 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 RNF19AQ9NV58 838 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 FAM53CQ9NYF3 392 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 ANAPC5Q9UJX4 755 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TRIP12Q14669 1992 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 H3BRJ5 948 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 H7C4K7 107 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 APOL1O14791 398 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 PAPSS1O43252 624 aaPredicted RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 MGEA5O60502 916 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TADA2AO75478 443 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 F9P00740 461 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 PFKMP08237 780 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 TGM2P21980 687 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 ACAT1P24752 427 aaKnown RBP6.3□□□□□ -1.4
VPS50-205ENST00000441602 LMO2P25791 158 aa6.3□□□□□ -1.4
VPS50-205ENST00000441602 NOS2P35228 1153 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms