RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 SERPINB6P35237 376 aa17.52■□□□□ 0.39
PMS1-213ENST00000441310 ALDH18A1P54886 795 aaKnown RBP17.52■□□□□ 0.39
PMS1-213ENST00000441310 NOP9Q86U38 636 aaKnown RBP17.52■□□□□ 0.39
PMS1-213ENST00000441310 ANAPC7Q9UJX3 599 aa17.52■□□□□ 0.39
PMS1-213ENST00000441310 APPL1Q9UKG1 709 aa17.52■□□□□ 0.39
PMS1-213ENST00000441310 MYH11P35749 1972 aa17.52■□□□□ 0.39
PMS1-213ENST00000441310 ZNF541Q9H0D2 1346 aa17.52■□□□□ 0.39
PMS1-213ENST00000441310 KITP10721 976 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 ETS1P14921 441 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 ZNF280AP59817 542 aaPredicted RBP17.51■□□□□ 0.39
PMS1-213ENST00000441310 ZNF720Q7Z2F6 126 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 RELL1Q8IUW5 271 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 NLGN2Q8NFZ4 835 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 FNDC8Q8TC99 324 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 TRPM4Q8TD43 1214 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 ABHD8Q96I13 439 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 FAM111AQ96PZ2 611 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 MARCOQ9UEW3 520 aaPredicted RBP17.51■□□□□ 0.39
PMS1-213ENST00000441310 TCEAL9Q9UHQ7 104 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 TELO2Q9Y4R8 837 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 BTBD19C9JJ37 291 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 PLA2G6O60733 806 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 PMLP29590 882 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 UGCGQ16739 394 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 MFSD4BQ5TF39 518 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 PLA2G4FQ68DD2 849 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 DAW1Q8N136 415 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 ICA1LQ8NDH6 482 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 RIN3Q8TB24 985 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 IRGQQ8WZA9 623 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 FHDC1Q9C0D6 1143 aaPredicted RBP17.51■□□□□ 0.39
PMS1-213ENST00000441310 SPATA7Q9P0W8 599 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 CAPN8A6NHC0 703 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 DHX15O43143 795 aaKnown RBP17.51■□□□□ 0.39
PMS1-213ENST00000441310 SLC5A2P31639 672 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 MTTPP55157 894 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 SLC25A3Q00325 362 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 HSP90AA5PQ58FG0 334 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 IYDQ6PHW0 289 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 PIP4K2CQ8TBX8 421 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 LPAR1Q92633 364 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 MRPL1Q9BYD6 325 aaKnown RBP17.51■□□□□ 0.39
PMS1-213ENST00000441310 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 VPS11Q9H270 941 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 PSME4Q14997 1843 aa17.51■□□□□ 0.39
PMS1-213ENST00000441310 K7ENM7 598 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 SLC26A4O43511 780 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 STRNO43815 780 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 GAP43P17677 238 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 MAPK4P31152 587 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 DNAL1Q4LDG9 190 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 ARHGEF16Q5VV41 709 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 ANKS1BQ7Z6G8 1248 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 LRRC43Q8N309 656 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 FIZ1Q96SL8 496 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 OLFML3Q9NRN5 406 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 TAGLN3Q9UI15 199 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 PCNTO95613 3336 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 MTA2O94776 668 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 PIM1P11309 404 aaPredicted RBP17.5■□□□□ 0.39
PMS1-213ENST00000441310 SSTR1P30872 391 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 SOX10P56693 466 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 ZNF200P98182 395 aaPredicted RBP17.5■□□□□ 0.39
PMS1-213ENST00000441310 HIC1Q14526 733 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 TLR1Q15399 786 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 KCTD21Q4G0X4 260 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 EFHC1Q5JVL4 640 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 TMC7Q7Z402 723 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 SLC47A2Q86VL8 602 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 ZSWIM2Q8NEG5 633 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 AGO4Q9HCK5 861 aaKnown RBP17.5■□□□□ 0.39
PMS1-213ENST00000441310 RNF146Q9NTX7 359 aa17.5■□□□□ 0.39
PMS1-213ENST00000441310 TRMUO75648 421 aaKnown RBP17.49■□□□□ 0.39
PMS1-213ENST00000441310 TFDP1Q14186 410 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 LPIN1Q14693 890 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 RABGAP1LQ5R372 815 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 MAP3K21Q5TCX8 1036 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 MCF2L2Q86YR7 1114 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 LIN28AQ9H9Z2 209 aaKnown RBP17.49■□□□□ 0.39
PMS1-213ENST00000441310 TTLL13PA6NNM8 815 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 CAPN14A8MX76 684 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 PRR5-ARHGAP8B1AHC4 643 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 H3BSA7 217 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 VWA5AO00534 786 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 LPXNO60711 386 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 HOXD12P35452 270 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 ARHGAP8P85298 464 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 GSTM4Q03013 218 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 PRKD1Q15139 912 aaPredicted RBP17.49■□□□□ 0.39
PMS1-213ENST00000441310 TCEAL1Q15170 157 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 SNRNP48Q6IEG0 339 aaKnown RBP17.49■□□□□ 0.39
PMS1-213ENST00000441310 NUP93Q8N1F7 819 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 EFCAB3Q8N7B9 438 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 POU5F2Q8N7G0 328 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 EPS8L1Q8TE68 723 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 RIT2Q99578 217 aa17.49■□□□□ 0.39
PMS1-213ENST00000441310 FAIMQ9NVQ4 179 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms