RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PACSIN1Q9BY11 444 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TRPV6Q9H1D0 765 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 LHX5Q9H2C1 402 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 CHRDQ9H2X0 955 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 NXF3Q9H4D5 531 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 MRPL47Q9HD33 250 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ERVK-5Q9HDB9 667 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PAK6Q9NQU5 681 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TRMT13Q9NUP7 481 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM105AQ9NUU6 356 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PARVAQ9NVD7 372 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 GDAP2Q9NXN4 497 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 DNAJB12Q9NXW2 375 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ABI2Q9NYB9 513 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 ADAM22Q9P0K1 906 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PUF60Q9UHX1 559 aaKnown RBP4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 AMFRQ9UKV5 643 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 OGDHLQ9ULD0 1010 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 STRIP2Q9ULQ0 834 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 PADI3Q9ULW8 664 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SNX12Q9UMY4 172 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 TFR2Q9UP52 801 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 GIT1Q9Y2X7 761 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 HYOU1Q9Y4L1 999 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 SCINQ9Y6U3 715 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 UMODL1Q5DID0 1318 aa4.21□□□□□ -1.74
HMGB1P37-201ENST00000439613 GRID2IPA4D2P6 1211 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ARL5CA6NH57 179 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 KPNA7A9QM74 516 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SHISA8B8ZZ34 492 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 J3QW42 95 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ENC1O14682 589 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 FANCGO15287 622 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 INPPL1O15357 1258 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 BUB1BO60566 1050 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CILPO75339 1184 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TADA3O75528 432 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ATP1A1P05023 1023 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 THP07101 528 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SETSIPP0DME0 302 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 GHRP10912 638 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CKBP12277 381 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CCL5P13501 91 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ABCB4P21439 1286 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 MMP8P22894 467 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 AKAP5P24588 427 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 MCM3P25205 808 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CD52P31358 61 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CDH5P33151 784 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 IRS1P35568 1242 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 GNL1P36915 607 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ADH7P40394 386 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLC1A1P43005 524 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 RAD23BP54727 409 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 NRLP54845 237 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 LILRA4P59901 499 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 NOMO3P69849 1222 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM189BP81408 668 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 HTRA3P83110 453 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PLAURQ03405 335 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CNGA2Q16280 664 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PKN2Q16513 984 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PPP2R5EQ16537 467 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CFAP221Q4G0U5 840 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SGO2Q562F6 1265 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 NAA35Q5VZE5 725 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 LCLAT1Q6UWP7 414 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SCARA5Q6ZMJ2 495 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLC24A5Q71RS6 500 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTU1Q7Z7A3 348 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ERICH1Q86X53 443 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PALB2Q86YC2 1186 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 NPAS4Q8IUM7 802 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 MCOLN2Q8IZK6 566 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CRYBG2Q8N1P7 616 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM86AQ8N2M4 240 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLC4A11Q8NBS3 891 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 APPL2Q8NEU8 664 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 OR13H1Q8NG92 308 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 OLIG1Q8TAK6 271 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF564Q8TBZ8 553 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SPATA18Q8TC71 538 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 SH3TC2Q8TF17 1288 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CPA5Q8WXQ8 436 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 RABGGTAQ92696 567 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 GOLGA1Q92805 767 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 APBB2Q92870 758 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 WNT8BQ93098 351 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PMEPA1Q969W9 287 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 C18orf25Q96B23 403 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 CYFIP2Q96F07 1278 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TNIP3Q96KP6 325 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 HEXIM2Q96MH2 286 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 UROC1Q96N76 676 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZMAT2Q96NC0 199 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 TOX2Q96NM4 488 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 DEFB118Q96PH6 123 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 PPP1R10Q96QC0 940 aaKnown RBP4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 OSBPL9Q96SU4 736 aa4.2□□□□□ -1.74
HMGB1P37-201ENST00000439613 ADAM2Q99965 735 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms