RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TRIM73Q86UV7 250 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 ZSWIM2Q8NEG5 633 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 CCDC110Q8TBZ0 833 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 OLFM3Q96PB7 478 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 CBWD1Q9BRT8 395 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 ARHGEF4Q9NR80 690 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 SLC17A7Q9P2U7 560 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 RANBP2P49792 3224 aaKnown RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 K7ENM7 598 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 FCHO1O14526 889 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 TM9SF1O15321 606 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 MAGEC1O60732 1142 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 MYCP01106 439 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 ETS2P15036 469 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 CPA2P48052 419 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 NOP14P78316 857 aaKnown RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 PDIA2Q13087 525 aaKnown RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 MARK2Q7KZI7 788 aaKnown RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 IL31RAQ8NI17 732 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 SEMA4DQ92854 862 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 LENG1Q96BZ8 264 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 AVENQ9NQS1 362 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 NDE1Q9NXR1 346 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 TMCO1Q9UM00 188 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 C2orf71A6NGG8 1288 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 B2RBV5 119 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 GJB1P08034 283 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 CRABP2P29373 138 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 ARL4CP56559 192 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 GPS1Q13098 491 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 NET1Q7Z628 596 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 LCA5Q86VQ0 697 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 MYLK4Q86YV6 388 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 MCOLN2Q8IZK6 566 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 ST13P4Q8IZP2 240 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 PPP2R3CQ969Q6 453 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 OXNAD1Q96HP4 312 aaPredicted RBP8.95□□□□□ -0.98
HPS4-206ENST00000439453 TAAR1Q96RJ0 339 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 PHACTR1Q9C0D0 580 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 OGDHLQ9ULD0 1010 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 TBC1D30Q9Y2I9 924 aa8.95□□□□□ -0.98
HPS4-206ENST00000439453 SCN10AQ9Y5Y9 1956 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CCDC85CA6NKD9 419 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 GOLGA8RI6L899 631 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 PSTPIP1O43586 416 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 RNASEH1O60930 286 aaKnown RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 CIB2O75838 187 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 RGS20O76081 388 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 PROSCO94903 275 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 TGDSO95455 350 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CALCAP01258 141 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 DLDP09622 509 aaKnown RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 ETS1P14921 441 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 HOXA13P31271 388 aaPredicted RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 GJC1P36383 396 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 ARSEP51690 589 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 TAS2R40P59535 323 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 EFTUD2Q15029 972 aaKnown RBP eCLIP8.94□□□□□ -0.98
HPS4-206ENST00000439453 RIPOR1Q6ZS17 1223 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CENPUQ71F23 418 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 BANPQ8N9N5 519 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 XXYLT1Q8NBI6 393 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 HELQQ8TDG4 1101 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 FAM81BQ96LP2 452 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 NACC1Q96RE7 527 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 HSPBP1Q9NZL4 362 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 KCND2Q9NZV8 630 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 ARMCX1Q9P291 453 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 PMM2O15305 246 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 LIASO43766 372 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 BAG2O95816 211 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 SPATA31D3P0C874 917 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 MYL2P10916 166 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CD58P19256 250 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 ERFP50548 548 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 GPX6P59796 221 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 AP2B1P63010 937 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 CDC16Q13042 620 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 MORF4L2Q15014 288 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 C6orf163Q5TEZ5 329 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 FAM91A1Q658Y4 838 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 LLGL2Q6P1M3 1020 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 SPATA31D4Q6ZUB0 917 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 TMPRSS6Q8IU80 811 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 SCUBE1Q8IWY4 988 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 RHOT1Q8IXI2 618 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 KATNAL2Q8IYT4 538 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 DAW1Q8N136 415 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 DHX38Q92620 1227 aaKnown RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 KLF6Q99612 283 aaPredicted RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 TTC1Q99614 292 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 WRAP73Q9P2S5 460 aaPredicted RBP8.94□□□□□ -0.98
HPS4-206ENST00000439453 RABGEF1Q9UJ41 708 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 DNPEPQ9ULA0 475 aa8.94□□□□□ -0.98
HPS4-206ENST00000439453 ZNF148Q9UQR1 794 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms