RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 NOMO3P69849 1222 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 MFSD7Q6UXD7 560 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 LRIG3Q6UXM1 1119 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 C3orf20Q8ND61 904 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 GBP5Q96PP8 586 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 TMEM121Q9BTD3 319 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 AJAP1Q9UKB5 411 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 ARAP2Q8WZ64 1704 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 GPR25O00155 361 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CDH16O75309 829 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAM107AO95990 144 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SMPD1P17405 629 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 MAGEA4P43358 317 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 BST2Q10589 180 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 LENG1Q96BZ8 264 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CCDC68Q9H2F9 335 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 PABPC3Q9H361 631 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 TRPV2Q9Y5S1 764 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CDY2AQ9Y6F7 541 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 NCANO14594 1321 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 GIPC1O14908 333 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CIB2O75838 187 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 KRT38O76015 456 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CYP1A2P05177 515 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 GSCP56915 257 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 NR1H3Q13133 447 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 CCNG2Q16589 344 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 MDH1BQ5I0G3 518 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 AP1ARQ63HQ0 302 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 LLGL2Q6P1M3 1020 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 ELMSAN1Q6PJG2 1045 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 TSHZ1Q6ZSZ6 1077 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 IPO11Q9UI26 975 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 XPO7Q9UIA9 1087 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 C2CD2Q9Y426 696 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 UMODL1Q5DID0 1318 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 E5RJQ4 531 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 EEF2KO00418 725 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 DNM1LO00429 736 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 EDIL3O43854 480 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 B4GALT4O60513 344 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 ECHS1P30084 290 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 MAP3K7CLP57077 242 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 MAMLD1Q13495 774 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 THOC5Q13769 683 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SPARCL1Q14515 664 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 C4orf50Q6ZRC1 276 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 SLC2A14Q8TDB8 520 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 OSBPL7Q9BZF2 842 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 TMBIM4Q9HC24 238 aa12.06□□□□□ -0.48
TRAPPC9-202ENST00000438773 RGS20O76081 388 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 ATN1P54259 1190 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 ZNF844Q08AG5 666 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 MGAT5BQ3V5L5 792 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 ALG3Q92685 438 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 TTC17Q96AE7 1141 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 FSD1LQ9BXM9 530 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 KRT82Q9NSB4 513 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 PAK5Q9P286 719 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 TLK1Q9UKI8 766 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 CDC25CP30307 473 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 RFC1P35251 1148 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 CNGA2Q16280 664 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 FAXCQ5TGI0 409 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 DAB2IPQ5VWQ8 1189 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 HES6Q96HZ4 224 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 L3MBTL3Q96JM7 780 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 SYT15Q9BQS2 421 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 SPON2Q9BUD6 331 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 FOXP3Q9BZS1 431 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 NXF3Q9H4D5 531 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 CHMP2BQ9UQN3 213 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 ZMYM2Q9UBW7 1377 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 DFFAO00273 331 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 CRCPO75575 148 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 HMBSP08397 361 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 SETSIPP0DME0 302 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 STIP1P31948 543 aaKnown RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 LHX1P48742 406 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 RASSF2P50749 326 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 CCDC33Q8N5R6 958 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 SEPT5Q99719 369 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 ADAM2Q99965 735 aa12.05□□□□□ -0.48
TRAPPC9-202ENST00000438773 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 COPEO14579 308 aa12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 DIAPH2O60879 1101 aa12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 MX2P20592 715 aa12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 EPHB2P29323 1055 aa12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 PITPNM3Q9BZ71 974 aa12.04□□□□□ -0.48
TRAPPC9-202ENST00000438773 TREHO43280 583 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms