RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SEC31AO94979 1220 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 THP07101 528 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TRIM49P0CI25 452 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TRIM49CP0CI26 452 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 POLR2LP62875 67 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 BNC1Q01954 994 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 PTPN12Q05209 780 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TRMT11Q7Z4G4 463 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 PPP1R16AQ96I34 528 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ADGBQ8N7X0 1667 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM191CA6NGB0 347 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 PMPCBO75439 489 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 GRK2P25098 689 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CHRNA5P30532 468 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ATN1P54259 1190 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CEP68Q76N32 757 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 RNFT2Q96EX2 444 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 KIAA1257Q9ULG3 409 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ITIH2P19823 946 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 SCNN1BP51168 640 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 SIKE1Q9BRV8 207 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 HTATIP2Q9BUP3 242 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 MRPL9Q9BYD2 267 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 MLXIPLQ9NP71 852 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 CDHR2Q9BYE9 1310 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF500O60304 480 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 SLC44A4Q53GD3 710 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 THTPAQ9BU02 230 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 VIPAS39Q9H9C1 493 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 NUP153P49790 1475 aaKnown RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TIPRLO75663 272 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 MIIPQ5JXC2 388 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 ELOA2Q8IYF1 753 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 NIF3L1Q9GZT8 377 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 SPRTNQ9H040 489 aaPredicted RBP11.58□□□□□ -0.56
SCN4A-201ENST00000435607 FBXO44Q9H4M3 255 aa11.58□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM114B3SHH9 223 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 SLC9A3R1O14745 358 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 VPS4BO75351 444 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 PGS1Q32NB8 556 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CHORDC1Q9UHD1 332 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF112Q9UJU3 913 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 PCDHB2Q9Y5E7 798 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 FBXO21O94952 628 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CCNG1P51959 295 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 BYSLQ13895 437 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 B3GALNT2Q8NCR0 500 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 OSBPL3Q9H4L5 887 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 C17orf75Q9HAS0 396 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 FANCEQ9HB96 536 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF70Q9UC06 446 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 PAX3P23760 479 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 FNDC3BQ53EP0 1204 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 FAM151AQ8WW52 585 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CPA5Q8WXQ8 436 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM159Q96B96 161 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 OMDQ99983 421 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM8AQ9HCN3 771 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 JCADQ9P266 1359 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 RAB27AP51159 221 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ATP12AP54707 1039 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 BTG3Q14201 252 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 SMAD5Q99717 465 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 RACGAP1Q9H0H5 632 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 SERHL2Q9H4I8 314 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 IGFLR1Q9H665 355 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 SERHLQ9NQF3 203 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 M0QYT0 321 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CDH16O75309 829 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 MYBP10242 640 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 AMD1P17707 334 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CYLC2Q14093 348 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM154Q6P9G4 183 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 C19orf18Q8NEA5 215 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 BBS4Q96RK4 519 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CLCC1Q96S66 551 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 VCPKMTQ9H867 229 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 C10orf88Q9H8K7 445 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ANKEF1Q9NU02 776 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 SNX6Q9UNH7 406 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 NEU2Q9Y3R4 380 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 ATP5BP06576 529 aaKnown RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 TGM2P21980 687 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 RAD23BP54727 409 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 CREMQ03060 361 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 BOLA3Q53S33 107 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 AHI1Q8N157 1196 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 RIBC1Q8N443 379 aaPredicted RBP11.57□□□□□ -0.56
SCN4A-201ENST00000435607 PACSIN1Q9BY11 444 aa11.57□□□□□ -0.56
SCN4A-201ENST00000435607 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 BIVM-ERCC5R4GMW8 1640 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 ADGRL3Q9HAR2 1447 aa11.56□□□□□ -0.56
SCN4A-201ENST00000435607 SPTLC1O15269 473 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms