RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ZNF543Q08ER8 600 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 TCF15Q12870 199 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 C10orf62Q5T681 223 aaPredicted RBP4.75□□□□□ -1.65
LINC00353-201ENST00000435401 PRAMEF17Q5VTA0 474 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 KLHDC7AQ5VTJ3 777 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 SLC18B1Q6NT16 456 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 XRRA1Q6P2D8 792 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 ZNF804AQ7Z570 1209 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 WDR53Q7Z5U6 358 aaPredicted RBP4.75□□□□□ -1.65
LINC00353-201ENST00000435401 DTX2Q86UW9 622 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 FAM186BQ8IYM0 893 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 SPICE1Q8N0Z3 855 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 GJA10Q969M2 543 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 TNIP3Q96KP6 325 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 CCDC138Q96M89 665 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 RIPOR3Q96MK2 946 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 ZNF48Q96MX3 618 aaPredicted RBP4.75□□□□□ -1.65
LINC00353-201ENST00000435401 MYD88Q99836 296 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 TINAGL1Q9GZM7 467 aaPredicted RBP4.75□□□□□ -1.65
LINC00353-201ENST00000435401 GJB4Q9NTQ9 266 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 MED16Q9Y2X0 877 aa4.75□□□□□ -1.65
LINC00353-201ENST00000435401 POM121BA6NF01 834 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 ISM1B1AKI9 464 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 TISP43B9A030 160 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 PRRT4C9JH25 899 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 QSOX1O00391 747 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 TPD52L2O43399 206 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 HOXB6P17509 224 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 PCSK6P29122 969 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 GCLCP48506 637 aaPredicted RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 UCP3P55916 312 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 RPS16P62249 146 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 SLC13A2Q13183 592 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 IFIT5Q13325 482 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 BOP1Q14137 746 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 SFRP4Q6FHJ7 346 aaPredicted RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 C11orf96Q7Z7L8 435 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 FAM46DQ8NEK8 389 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 OR6B3Q8NGW1 331 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 KBTBD7Q8WVZ9 684 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 DDX17Q92841 729 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 SGCZQ96LD1 299 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 ARPC5LQ9BPX5 153 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 QTRT1Q9BXR0 403 aaKnown RBP4.74□□□□□ -1.65
LINC00353-201ENST00000435401 PCGF6Q9BYE7 350 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 DPH1Q9BZG8 443 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 BTBD1Q9H0C5 482 aa4.74□□□□□ -1.65
LINC00353-201ENST00000435401 ARID4BQ4LE39 1312 aaPredicted RBP4.73□□□□□ -1.65
LINC00353-201ENST00000435401 RASA4BC9J798 803 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 ZNF213O14771 459 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 PPM1DO15297 605 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 RASA4O43374 803 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 TBC1D4O60343 1298 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 TLR5O60602 858 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 ONECUT2O95948 504 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 GRPP07492 148 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
LINC00353-201ENST00000435401 CHRM3P20309 590 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 TNFSF4P23510 183 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 HTR3AP46098 478 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 STT3AP46977 705 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 SLC11A2P49281 568 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 TOB1P50616 345 aaPredicted RBP4.73□□□□□ -1.65
LINC00353-201ENST00000435401 EEFSECP57772 596 aaKnown RBP4.73□□□□□ -1.65
LINC00353-201ENST00000435401 CEP78Q5JTW2 689 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 FAM209BQ5JX69 171 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 VPS53Q5VIR6 699 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 ZNF783Q6ZMS7 281 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 TOGARAM2Q6ZUX3 1019 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 MICU3Q86XE3 530 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 SLC15A4Q8N697 577 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 VPS37AQ8NEZ2 397 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 OR56A3Q8NH54 315 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 KIAA1191Q96A73 305 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 SUCLG2Q96I99 432 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 AS3MTQ9HBK9 375 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 NLRC4Q9NPP4 1024 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 SERHLQ9NQF3 203 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 DLL3Q9NYJ7 618 aa4.73□□□□□ -1.65
LINC00353-201ENST00000435401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 H0YIZ8 118 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 SMIM22K7EJ46 135 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 PPEF2O14830 753 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 SLC16A3O15427 465 aaKnown RBP4.72□□□□□ -1.65
LINC00353-201ENST00000435401 GNAI2P04899 355 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 TSHRP16473 764 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 CYP2C18P33260 490 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 HTRA4P83105 476 aaPredicted RBP4.72□□□□□ -1.65
LINC00353-201ENST00000435401 OS9Q13438 667 aaPredicted RBP4.72□□□□□ -1.65
LINC00353-201ENST00000435401 SUPT20HL1Q3ZLR7 823 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 PCID2Q5JVF3 399 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 ICE2Q659A1 982 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 PPP1R32Q7Z5V6 425 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 MPP5Q8N3R9 675 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 CCDC33Q8N5R6 958 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 DNAJC5GQ8N7S2 189 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 RNF152Q8N8N0 203 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 NMD3Q96D46 503 aaKnown RBP4.72□□□□□ -1.65
LINC00353-201ENST00000435401 SH2D3AQ9BRG2 576 aa4.72□□□□□ -1.65
LINC00353-201ENST00000435401 AFF4Q9UHB7 1163 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms