RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ORC2Q13416 577 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SNAPC2Q13487 334 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 AAGABQ6PD74 315 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 Q6ZNX1 250 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PTAR1Q7Z6K3 402 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 SLC51AQ86UW1 340 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CLVS1Q8IUQ0 354 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 FBXL8Q96CD0 374 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CBWD1Q9BRT8 395 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 EPB41L1Q9H4G0 881 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 JMJD4Q9H9V9 463 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 NOCTQ9UK39 431 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ZNF804BA4D1E1 1349 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ATP8B3O60423 1300 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ESYT2A0FGR8 921 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 RGL2O15211 777 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 MXI1P50539 228 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CLCN2P51788 898 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ARHGAP4P98171 946 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PACS1Q6VY07 963 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 LMO3Q8TAP4 145 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 AGR3Q8TD06 166 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 OLFML3Q9NRN5 406 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 DNAJB4Q9UDY4 337 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CEPT1Q9Y6K0 416 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 EML1O00423 815 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 OXSR1O95747 527 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TCN1P20061 433 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 HOXA7P31268 230 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 COPAP53621 1224 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 BASP1P80723 227 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CDKL1Q00532 357 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TGFBIQ15582 683 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CES4AQ5XG92 561 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 UTS2BQ765I0 119 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 MIER3Q7Z3K6 550 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ZNF34Q8IZ26 560 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ZFRQ96KR1 1074 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 GPR101Q96P66 508 aaPredicted RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 MRPS26Q9BYN8 205 aaKnown RBP7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ANO3Q9BYT9 981 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PLGRKTQ9HBL7 147 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 ITM2AO43736 263 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 AKR1B1P15121 316 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 VAMP7P51809 220 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 DLGAP5Q15398 846 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 USH1GQ495M9 461 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 HYIQ5T013 277 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 VWA5B1Q5TIE3 1220 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 C16orf87Q6PH81 154 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 MFSD7Q6UXD7 560 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PPP1R36Q96LQ0 422 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 PARVGQ9HBI0 331 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 KCNK4Q9NYG8 393 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 CDH22Q9UJ99 828 aa7.76□□□□□ -1.17
CPSF6-202ENST00000435070 TCRBV7S3A2A0A539 114 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 GZMAP12544 262 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CENPCQ03188 943 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PQLC1Q8N2U9 271 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PPP1R14BQ96C90 147 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 RIOX1Q9H6W3 641 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 AIM2O14862 343 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 DGKIO75912 1065 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 SLITRK3O94933 977 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CYP19A1P11511 503 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 ADSSP30520 456 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CPOXP36551 454 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 NR1H2P55055 460 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PRAMEP78395 509 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 DCAF6Q58WW2 860 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 TSPAN14Q8NG11 270 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 RSPH1Q8WYR4 309 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CFAP36Q96G28 342 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 NDEL1Q9GZM8 345 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 NYXQ9GZU5 481 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 TBC1D23Q9NUY8 699 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CAMTA1Q9Y6Y1 1673 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 KANSL1LA0AUZ9 987 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 FUOMA2VDF0 154 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CASQ2O14958 399 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 ZC3H11AO75152 810 aaKnown RBP eCLIP7.75□□□□□ -1.173e-7■■■■■ 36.2
CPSF6-202ENST00000435070 ZBTB11O95625 1053 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 KRT1P04264 644 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 FGFR3P22607 806 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 RPA1P27694 616 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CCDC117Q8IWD4 279 aaPredicted RBP7.75□□□□□ -1.17
CPSF6-202ENST00000435070 WRNIP1Q96S55 665 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 THEGQ9P2T0 379 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 PCDHA1Q9Y5I3 950 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 UBR1Q8IWV7 1749 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 CROCCQ5TZA2 2017 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 E2F8A0AVK6 867 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 BTBD19C9JJ37 291 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 K7EPI3 171 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 FUCA1P04066 466 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 UBXN2AP68543 259 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 ACAD10Q6JQN1 1059 aa7.75□□□□□ -1.17
CPSF6-202ENST00000435070 ADGRD1Q6QNK2 874 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms